g.raimondii_cottongen_reftransV1_0001112, g.raimondii_cottongen_reftransV1_0001112 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001112
Unique Nameg.raimondii_cottongen_reftransV1_0001112
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length720
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr01chromosomeg.raimondii_cottongen_reftransV1_0001112:1..720 .
Chr01:8966194..8967208 -
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: V4L0C2_EUTSA (MATE efflux family protein OS=Eutrema salsugineum GN=EUTSA_v10002904mg PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.315e-88
Identity = 140/237 (59.07%), Postives = 181/237 (76.37%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS++ GL GALETL GQAYGA +Y K+G+YTY AI  ++PIC  + ++W+YM+KLL+ IGQDP+++++A  YA+ LIP LF  A+ Q   RF Q+Q LV+P+++ +L TL F+I VCW LVF FG GS G ALAIS S WFNV++L  Y+R+S SCEKTR+    D    VK+FFH+ IPSA M CLEWW FE+L+L SGLLPN KLETSVLS+CL+  SLHY I
Sbjct:   70 VALATSFANVSGFSIMAGLVGALETLCGQAYGAKRYAKMGTYTYSAIASNVPICFLISIVWIYMEKLLISIGQDPEISKLAGSYAVWLIPALFAQAVQQPLTRFLQTQGLVIPLLYCALTTLLFYIPVCWTLVFTFGLGSNGAALAISLSYWFNVLILAVYVRFSSSCEKTRSFVSHDFVSGVKQFFHYGIPSAAMTCLEWWLFELLILSSGLLPNPKLETSVLSVCLTIGSLHYVI 306          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U5GCB2_POPTR (MATE efflux family protein OS=Populus trichocarpa GN=POPTR_0005s15040g PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.605e-88
Identity = 146/235 (62.13%), Postives = 190/235 (80.85%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHY 706
            V+I  +F  VTGFSLL+GL G LETL GQAYGA QY KLG+YTYCAII  +PIC+PV +LW++MD++L+ IGQDP+++ +A +YA+CLIP LF  AI+QS +R+FQS +L+LPM+ S+  TL FHI +CW L+FK+  G KG ALAI  S W NVI LG YM +S SC+KTR ++  D+F S+KEFF FA+PSAVM CLEWW+FE+L+L++GLLPNS+LETSVLSICL++ SLH+
Sbjct:   66 VSIGGSFATVTGFSLLFGLTGGLETLCGQAYGAEQYQKLGTYTYCAIISLIPICIPVSILWIFMDRILIEIGQDPEISTVACQYAICLIPALFADAILQSLLRYFQSMNLILPMLLSTSVTLFFHIPLCWALIFKWKLGVKGAALAIDVSYWLNVIFLGLYMGFSSSCKKTRVINWNDIFSSIKEFFCFALPSAVMVCLEWWTFELLILLAGLLPNSQLETSVLSICLTTISLHF 300          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: M5XS17_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015054mg PE=4 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 8.475e-88
Identity = 142/223 (63.68%), Postives = 182/223 (81.61%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETS 667
            V+IAT+F +VTGFSLL GL GALETL GQAYGA QY KLG YTY +I+C   +C+P+ LLW++ DK+L LIGQDP ++ +A++Y++CLIP LF YA++QS VR+FQ+QSL+LPM++SS A LC H+ +CW L FK   GS G ALAISFS WFNV+LLGFYM+YS +CEKTR   L  +VFL++KEFF FA+PSA+M CLEWWS+E+L+L+SG+L N KLETS
Sbjct:   14 VSIATSFTSVTGFSLLSGLVGALETLCGQAYGAEQYQKLGIYTYTSILCLCLVCVPISLLWIFTDKILQLIGQDPLISNVAHKYSLCLIPNLFSYAVLQSLVRYFQTQSLILPMLYSSCAALCLHVPLCWGLTFKLKLGSIGAALAISFSCWFNVLLLGFYMKYSVACEKTRAHVLSIEVFLNIKEFFRFAVPSALMVCLEWWSYEVLILLSGILSNPKLETS 236          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: D7L7F2_ARALL (MATE efflux family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_342752 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.009e-87
Identity = 140/234 (59.83%), Postives = 177/234 (75.64%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLH 703
            VA+ATAF NV+GF +++GL GALETL GQAYGA QY K+G+YTY AI+ ++PICL + +LW YMDKLL+ IGQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC  LV+ FG GS G ALAI FS WFNV++L  Y+R+S SCEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLH
Sbjct:   70 VALATAFANVSGFGIMYGLVGALETLCGQAYGAKQYDKIGTYTYSAIVSNVPICLLISILWFYMDKLLISIGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLTLVYAFGLGSNGAALAIGFSYWFNVLILALYVRFSRSCEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLH 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: D7L7F3_ARALL (MATE efflux family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480065 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.135e-87
Identity = 140/237 (59.07%), Postives = 179/237 (75.53%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFSL++GL GALETL GQAYGA QY K+G+YTY AI+ ++PI + + +LW YMDKLL+ IGQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC VLV+ FG GS G ALAI  S WFNV++L  Y+R+S +CEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   70 VALATSFANVSGFSLMFGLVGALETLCGQAYGAKQYAKIGTYTYSAIVSNIPIVVLISILWFYMDKLLISIGQDPDISKVAGSYAVCLIPALLAQAVQQPLNRFLQTQGLVLPLLYCAITTLLFHIFVCLVLVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSACEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLHYVI 306          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: DTX1_ARATH (MATE efflux family protein DTX1 OS=Arabidopsis thaliana GN=DTX1 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.773e-87
Identity = 136/238 (57.14%), Postives = 177/238 (74.37%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            VA+A +F NVTGFS++ GL GALETL GQAYGA QY K+G+Y Y AI  ++PIC  + +LW+Y++K+L+ +GQDP+++ IA  YA  LIP LFG AIV    RF  +Q LV+P++F+++ TL FH++VCW LVF FG G  G A+A S S WF  ++L  Y+R+S SCEKTR    +D   S+K+FF + IPSA M CLEWW FEIL+L SGLLPN KLETSVLSICL+ ++LHY IS
Sbjct:   67 VALANSFTNVTGFSIMCGLVGALETLCGQAYGAKQYEKIGTYAYSAIASNIPICFLISILWLYIEKILISLGQDPEISRIAGSYAFWLIPALFGQAIVIPLSRFLLTQGLVIPLLFTAVTTLLFHVLVCWTLVFLFGLGCNGPAMATSVSFWFYAVILSCYVRFSSSCEKTRGFVSRDFVSSIKQFFQYGIPSAAMICLEWWLFEILILCSGLLPNPKLETSVLSICLTIETLHYVIS 304          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE9_ARATH (MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 2.643e-87
Identity = 137/237 (57.81%), Postives = 177/237 (74.68%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY K+G+YT+ AI+ ++PI + + +LW YMDKL V +GQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC +LV+ FG GS G ALAI  S WFNV++L  Y+R+S SCEKTR     D  LSVK+FF + IPSA M  +EW  FE L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   70 VALATSFTNVSGFSVMFGLAGALETLCGQAYGAKQYAKIGTYTFSAIVSNVPIVVLISILWFYMDKLFVSLGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLILVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSSCEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFEFLILSSGLLPNPKLETSVLSICLTTSSLHYVI 306          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE6_ARATH (MATE efflux family protein 6 OS=Arabidopsis thaliana GN=DTXL2 PE=3 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.198e-86
Identity = 136/237 (57.38%), Postives = 177/237 (74.68%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL G+LETL+GQAYGA QY K+G+YTY AI  ++PIC+ + +LW+YM+KLL+ +GQDP ++ +A  YA+ LIP LF +AIV    RF  +Q LVLP+++ +L TL FHI VCW LV   G GS G ALAIS S WF  + L  Y+R+S SCEKTR    +D   SVK+FF + +PSA M CLEWW FE+L+L SGLL N KLETSVLSICL++ +LHY I
Sbjct:   67 VALATSFTNVSGFSIMFGLVGSLETLSGQAYGAKQYEKMGTYTYSAISSNIPICVLISILWIYMEKLLISLGQDPDISRVAGSYALRLIPTLFAHAIVLPLTRFLLAQGLVLPLLYFALTTLLFHIAVCWTLVSALGLGSNGAALAISVSFWFFAMTLSCYVRFSSSCEKTRRFVSQDFLSSVKQFFRYGVPSAAMLCLEWWLFELLILCSGLLQNPKLETSVLSICLTTATLHYVI 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE8_ARATH (MATE efflux family protein 8 OS=Arabidopsis thaliana GN=DTXL4 PE=3 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.783e-85
Identity = 133/234 (56.84%), Postives = 174/234 (74.36%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLH 703
            V +ATAF NV+GF +++GL GALETL GQAYGA QY K+G+YT+ AI+ ++PI + + +LW YMDKL V +GQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC +LV+ FG GS G ALAI  S WFNV++L  Y+R+S +CEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLH
Sbjct:   70 VTLATAFANVSGFGIMYGLVGALETLCGQAYGAKQYTKIGTYTFSAIVSNVPIVVLISILWFYMDKLFVSLGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLILVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSACEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLH 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE5_ARATH (MATE efflux family protein 5 OS=Arabidopsis thaliana GN=DTXL1 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 8.313e-83
Identity = 136/237 (57.38%), Postives = 176/237 (74.26%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+L+GL GALETL GQAYGA QY K+G+YTY A   ++PIC+ + +LW+Y++KLL+ +GQDP ++ +A  YA+ LIP LF +A      RF  +Q LVLP+++ +L TL FHI VCW  V+ FG GS G A+AIS S WF V++L  Y+RYS SC+KTR     D    +K+FFHF +PSA M CLEWW FE+L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   67 VALATSFTNVSGFSILFGLAGALETLCGQAYGAKQYEKIGTYTYSATASNIPICVLISVLWIYIEKLLISLGQDPDISRVAGSYALWLIPALFAHAFFIPLTRFLLAQGLVLPLLYCTLTTLLFHIPVCWAFVYAFGLGSNGAAMAISVSFWFYVVILSCYVRYSSSCDKTRVFVSSDFVSCIKQFFHFGVPSAAMVCLEWWLFELLILCSGLLPNPKLETSVLSICLTTASLHYVI 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: MATE7_ARATH (MATE efflux family protein 7 OS=Arabidopsis thaliana GN=DTXL3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 7.629e-82
Identity = 125/237 (52.74%), Postives = 174/237 (73.42%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY K+G+YTY A+  ++PIC  + +LW+Y++KLL+ +GQ+P ++ +A  Y++ L+P LF +AI     RF  +Q LV+ +++S++ TL FHI VCW LVF  G GS G A+AIS S WF  ++L  ++R+  SCEKTR     D   S+K++F + +PSA + CLEWW FE+L+L SGLLPN KLETSVLSICL+  +LHY I
Sbjct:   67 VALATSFTNVSGFSIMFGLVGALETLCGQAYGAEQYEKIGTYTYSAMASNIPICFIISILWIYIEKLLITLGQEPDISRVAGSYSLWLVPALFAHAIFLPLTRFLLAQGLVISLLYSAMTTLLFHIAVCWTLVFALGLGSNGAAIAISLSFWFYAVILSCHVRFFSSCEKTRGFVSNDFMSSIKQYFQYGVPSAGLICLEWWLFELLILCSGLLPNPKLETSVLSICLTIGTLHYVI 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: LAL5_ARATH (MATE efflux family protein LAL5 OS=Arabidopsis thaliana GN=LAL5 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.104e-37
Identity = 87/236 (36.86%), Postives = 139/236 (58.90%), Query Frame = 2
Query:    8 IATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            +A ++  VTGF+ + GL GALETL GQ +GA  Y  LG +   + I SL   + + +LW + + + +L+ QDP +++ A  Y   L PGL  Y  +Q+ +RF Q+Q +V P++  S   L  +I   + LV   G G  G  +A S S W   + LGFY+  S   ++T T    + F  V      +IPSA M CLE+W+FEILV ++GL+ N ++ TS+++IC++++S+ Y ++
Sbjct:   73 LANSWATVTGFAFMTGLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDPSISKQAALYMKYLAPGLLAYGFLQNILRFCQTQCIVTPLVLFSFLPLVINIGTTYALVHLAGLGFIGAPIATSISLWIAFVSLGFYVICSDKFKETWTGFSMESFHHVVLNLTLSIPSAAMVCLEYWAFEILVFLAGLMRNPEITTSLVAICVNTESISYMLT 308          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: ALF5_ARATH (MATE efflux family protein ALF5 OS=Arabidopsis thaliana GN=ALF5 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.402e-36
Identity = 80/237 (33.76%), Postives = 141/237 (59.49%), Query Frame = 2
Query:    8 IATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            +A ++  V+GF+ + GL G+LETL GQ +GA +Y  LG +   + I SL   + + + W + + +  L+ QDP +++ A  Y     PGL  Y  +Q+ +RF Q+QS++ P++  S   L  +I   +VLV+  G G  G  +A S S W   + LG Y+  S   ++T T    + F  +      ++PSA M CLE+W+FEILV ++G++PN ++ TS+++IC++++++ Y +++
Sbjct:   81 LANSWATVSGFAFMVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPSISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVYVAGLGFIGAPIATSISLWIAFLSLGTYVMCSEKFKETWTGFSLESFRYIVINLTLSLPSAAMVCLEYWAFEILVFLAGVMPNPEINTSLVAICVNTEAISYMLTY 317          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.492e-29
Identity = 74/227 (32.60%), Postives = 121/227 (53.30%), Query Frame = 2
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICL 685
            +IAT       + ++ G+  A++T+ GQAYGA QY  +G     A++  L   + +  L+ Y   +L  +GQ   +A     +A  +IP ++ +A+     RF Q+Q++V P+ + SL     H ++ W++     FG  G AL +SFS W  V + G Y+  SP+C++T T      F  +  +F   + SAVM CLE W  + LV++SGLL N  +    +SIC+
Sbjct:   92 SIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICM 318          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.06 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.730e-21
Identity = 72/238 (30.25%), Postives = 114/238 (47.90%), Query Frame = 2
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            A A  F   TG+ +  G   A +TL    +GA +  +LG       I    + LP+CL+W Y   +L+ + Q P++AE + ++   LIPG  GY   +   +F Q+Q +     +  L T   ++ + ++LV  +G G KG  LA   S W + ILL  Y +Y    E     + K    +   F   ++   VM   EWW+FEI+ L++G L    L     S+ +++D L  TI F
Sbjct:   48 AFAYMFAMSTGWLIALGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKGAEAWNGWN-KRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQ--SVIMTTDQLLNTIPF 282          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4L0C2_EUTSA2.315e-8859.07MATE efflux family protein OS=Eutrema salsugineum ... [more]
U5GCB2_POPTR5.605e-8862.13MATE efflux family protein OS=Populus trichocarpa ... [more]
M5XS17_PRUPE8.475e-8863.68Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7L7F2_ARALL1.009e-8759.83MATE efflux family protein OS=Arabidopsis lyrata s... [more]
D7L7F3_ARALL1.135e-8759.07MATE efflux family protein OS=Arabidopsis lyrata s... [more]

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BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DTX1_ARATH1.773e-8757.14MATE efflux family protein DTX1 OS=Arabidopsis tha... [more]
MATE9_ARATH2.643e-8757.81MATE efflux family protein 9 OS=Arabidopsis thalia... [more]
MATE6_ARATH1.198e-8657.38MATE efflux family protein 6 OS=Arabidopsis thalia... [more]
MATE8_ARATH5.783e-8556.84MATE efflux family protein 8 OS=Arabidopsis thalia... [more]
MATE5_ARATH8.313e-8357.38MATE efflux family protein 5 OS=Arabidopsis thalia... [more]
MATE7_ARATH7.629e-8252.74MATE efflux family protein 7 OS=Arabidopsis thalia... [more]
LAL5_ARATH2.104e-3736.86MATE efflux family protein LAL5 OS=Arabidopsis tha... [more]
ALF5_ARATH4.402e-3633.76MATE efflux family protein ALF5 OS=Arabidopsis tha... [more]
TT12_ARATH8.492e-2932.60Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
YAO6_SCHPO2.730e-2130.25Uncharacterized transporter C11D3.06 OS=Schizosacc... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001112 ID=g.raimondii_cottongen_reftransV1_0001112; Name=g.raimondii_cottongen_reftransV1_0001112; organism=Gossypium raimondii; type=contig; length=720bp
TGTTGCCATCGCCACAGCTTTCTGCAATGTCACTGGCTTTAGTCTCCTTT
GGGGACTTTGTGGTGCACTCGAAACCCTAAACGGACAAGCATATGGGGCA
ACGCAATACTATAAACTAGGAAGCTACACTTATTGTGCCATAATATGTTC
CCTTCCAATTTGTCTCCCGGTGTGTCTCCTATGGATGTATATGGACAAAC
TATTAGTGCTAATAGGTCAAGACCCTCAAGTTGCAGAGATAGCTAATAGA
TACGCCATGTGTCTCATACCTGGATTATTTGGTTACGCCATTGTTCAATC
ACAAGTTCGTTTCTTCCAATCCCAGAGCTTGGTTCTTCCTATGATGTTTA
GTTCTCTTGCAACATTGTGTTTCCATATAATTGTTTGTTGGGTTTTGGTA
TTCAAATTTGGGTTTGGAAGCAAAGGAGGGGCATTGGCTATCAGTTTCTC
GAATTGGTTTAATGTTATATTGCTTGGGTTTTACATGAGATACTCACCTT
CATGTGAGAAAACCCGAACCCTCCATTTGAAAGATGTTTTCTTGAGTGTC
AAGGAGTTCTTTCATTTTGCCATACCTTCTGCAGTAATGGCTTGCCTCGA
ATGGTGGTCGTTCGAGATTCTTGTATTAATGTCTGGACTTCTGCCAAATT
CCAAGCTTGAAACATCGGTTCTTTCTATATGCCTTTCAAGTGATTCTTTG
CATTATACTATATCGTTTGG
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