g.raimondii_cottongen_reftransV1_0001112, g.raimondii_cottongen_reftransV1_0001112 (contig) Gossypium raimondii
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A061EHE6_THECC (MATE efflux family protein OS=Theobroma cacao GN=TCM_019339 PE=3 SV=1) HSP 1 Score: 384.03 bits (985), Expect = 1.713e-128 Identity = 203/238 (85.29%), Postives = 213/238 (89.50%), Query Frame = 2 Query: 5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 AIAT+FCNVTGFSLLWGLCGALETLNGQAYGA QY KLGSYTYCAII +LPICLPVCLLWMYMDKLLVLIGQDPQ A +A RY+M LIP LF YAI+QSQVRFFQSQSLVLPM+F SLATLCFHI VCWVLVFK G G+ G A+AISFS WFNVILLG YMRYS SCEKTR L+L DV LSVKEFF FAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSS SLHY + F Sbjct: 66 AIATSFCNVTGFSLLWGLCGALETLNGQAYGAMQYQKLGSYTYCAIISTLPICLPVCLLWMYMDKLLVLIGQDPQAAVVACRYSMWLIPALFAYAILQSQVRFFQSQSLVLPMLFISLATLCFHIPVCWVLVFKSGLGNTGAAMAISFSYWFNVILLGLYMRYSSSCEKTRILYLNDVILSVKEFFQFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSTSLHYNVPF 303
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2TXY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 8.381e-107 Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 VAIAT+FCNVTGFSLL G GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G + G AL+I S W NVILLGF+MRYS SCEKTR LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F Sbjct: 60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2T139_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_008G058000 PE=3 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 3.069e-106 Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 VAIAT+FCNVTGFSLL G GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G + G AL+I S W NVILLGF+MRYS SCEKTR LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F Sbjct: 60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2SVK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.045e-93 Identity = 153/217 (70.51%), Postives = 181/217 (83.41%), Query Frame = 2 Query: 68 LETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 +ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G + G AL+I S W NVILLGF+MRYS SCEKTR LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F Sbjct: 1 METLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 217
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U7DYD6_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0229s00260g PE=4 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 9.390e-92 Identity = 145/235 (61.70%), Postives = 190/235 (80.85%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHY 706 V+I +F VTGFSLL+GL G LETL GQAYGA QY K G+YTYCAII LPIC+PV +LW++MD++L+ IGQDP+++ +A RYA CLIP LF YA++QS +R++QSQ L+LPM+FS+ ATLCFHI +CW L+FK+ GS G AL+I S W NV+ L YM +S SC+KTR ++ +F S+KEFF FA+PSAVM CLEWW+FE+L+L++GLLP+S+LETSVLSICL++ SLH+ Sbjct: 62 VSIGGSFAGVTGFSLLFGLAGGLETLCGQAYGAGQYQKFGTYTYCAIISLLPICVPVSILWIFMDRILIAIGQDPEISTVACRYATCLIPALFAYAVLQSLLRYYQSQGLILPMLFSTCATLCFHIPLCWALIFKWELGSTGAALSIDVSYWLNVVFLALYMGFSSSCKKTRVIYWNHIFSSIKEFFRFALPSAVMVCLEWWTFELLILLAGLLPDSQLETSVLSICLATTSLHF 296
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D3D4R0_BRAOL (MATE efflux family protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.674e-91 Identity = 144/238 (60.50%), Postives = 180/238 (75.63%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715 VA+AT+F NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI ++PIC + LW+YMDKLLV +GQDP ++ +A YA LIP LFG AIV RF +Q LVLP+++ ++ TL FHI VCW+LVFKFG GS G AL+IS S WF ++L Y+R+S SCE TRT D VK+FFH+ +PSA M CLEWW FE+L+L SGLLPN KLETSVLSICL++++LHY IS Sbjct: 67 VALATSFTNVSGFSIMYGLAGALETLCGQAYGAKQYEKLGTYTYSAIASNIPICFLISTLWIYMDKLLVSLGQDPDISRVAGSYAFSLIPALFGQAIVIPLTRFLLTQGLVLPLLYCAVTTLLFHISVCWILVFKFGLGSNGAALSISVSFWFYAVILACYVRFSTSCEMTRTFVSDDFVSCVKQFFHYGVPSAAMLCLEWWLFELLILSSGLLPNPKLETSVLSICLTTETLHYVIS 304
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: R0G4M3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013560mg PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.029e-90 Identity = 146/237 (61.60%), Postives = 179/237 (75.53%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712 VA+ATAF NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI+ ++P CL + +LW YMDKLLV IGQDP ++ +A YA+CLIP LF A+ Q RF Q+Q LVLP+++ ++ TL FHI VC VLV+KFG GS G ALAIS S WFNV++L Y+R+S SC +TR D S K+FF + IPSA MAC+EW FE LVL SGLLPN KLETSVLSICL++ SLHY I Sbjct: 72 VALATAFTNVSGFSIMYGLVGALETLCGQAYGAKQYTKLGTYTYSAIVSNVPFCLLISILWFYMDKLLVSIGQDPDISRVAGSYAVCLIPALFSQAVQQPLTRFLQTQGLVLPLLYCAVTTLLFHIPVCLVLVYKFGLGSNGAALAISLSYWFNVLILALYVRFSSSCVETRGFVSDDFVSSAKQFFQYGIPSAAMACIEWSLFEFLVLSSGLLPNPKLETSVLSICLTTGSLHYVI 308
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2N775_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_001G084200 PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.065e-90 Identity = 155/239 (64.85%), Postives = 195/239 (81.59%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 VAIAT+F NVTGFSLL+G+ GALETL GQAYGA QY KLG+YTYC+I+ + ICLPV L W++MD+ L+ +GQDPQ++ +A+ Y++ LIP LF AI+QS VR+FQSQS +LP+ SS AT+CFH+ +CWVLV K G G ALAI+ + WFNVI+LGFYMR+S SCE TRT+ + DVF S+KEF FA+PSAVM CLEWWSFE+LVL+SGLLP+S+LETSVLSICLS+ SLHY + + Sbjct: 62 VAIATSFTNVTGFSLLFGMAGALETLGGQAYGAGQYQKLGTYTYCSILSLITICLPVSLFWIFMDEFLIFMGQDPQISHVASIYSIWLIPALFADAILQSLVRYFQSQSQILPLFLSSCATICFHVPLCWVLVHKTNLGYVGAALAITLALWFNVIVLGFYMRWSASCESTRTVIVGDVFASIKEFLGFALPSAVMCCLEWWSFELLVLLSGLLPDSELETSVLSICLSTTSLHYFVPY 300
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: B9SPZ5_RICCO (MATE efflux family protein OS=Ricinus communis GN=RCOM_0467100 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 2.235e-90 Identity = 147/239 (61.51%), Postives = 190/239 (79.50%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 V++A++F N TGF+LL GL GALETL GQAYGA QY K GSY YCAII LPICLP +LW++MD++L+ IG DP+++ A RY++ LIP LFG+AI+QS VR+FQ+QSL+LPM+ SS ATL HI +CW LVFK+ FG+ GGA++I S W NVI L YMR+S SCEKTR L KDVF S+ EF+ FA+PSAVM CLEWW+FE+L L++G LPNSKLETSVLSIC+++ +++Y + + Sbjct: 57 VSVASSFTNATGFALLIGLSGALETLCGQAYGAGQYKKFGSYLYCAIISLLPICLPASILWIFMDRILISIGLDPKISMEACRYSIGLIPALFGFAILQSLVRYFQTQSLILPMLISSCATLSAHIPLCWALVFKWEFGAIGGAMSIGLSYWLNVIFLACYMRWSSSCEKTRVLCWKDVFSSISEFWRFALPSAVMVCLEWWTFELLTLLAGFLPNSKLETSVLSICITTTTVNYYVQY 295
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U5FG70_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s10450g PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 6.210e-90 Identity = 142/220 (64.55%), Postives = 176/220 (80.00%), Query Frame = 2 Query: 20 FCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSI 679 F +VTGFSLL+GL GALETL GQAYGA QY + +YTYCAII + +CLP+ LWM+ DKLL+LIGQDP ++ +A +Y++CLIP LF YAI+Q+ +R+FQ+QSL+LPM+FSS A+LCFHI +CW LVFK G G ALAIS S W NVILLG YM+ S CEKTR++ KDVF ++EFF FA+PSAVM CLEWWS+E+L+L+SGLL N K ETSVLSI Sbjct: 23 FTSVTGFSLLFGLAGALETLCGQAYGAEQYQTVRTYTYCAIISLILVCLPISFLWMFTDKLLILIGQDPSISHVARKYSICLIPNLFSYAILQALIRYFQTQSLILPMLFSSFASLCFHITLCWALVFKAEMGIIGAALAISLSYWLNVILLGLYMKCSSECEKTRSVFSKDVFFGIREFFRFAVPSAVMTCLEWWSYEVLILLSGLLRNPKEETSVLSI 242
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.084e-13 Identity = 65/214 (30.37%), Postives = 105/214 (49.07%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643 V +A A NV G S+ +GL A +TL Q YG+ +G + L CLP L++ +L+L QDP V+ + Y IP L + QV++ +Q +VLP + + +A + + ++ V++ G G ALA + + + +LL Y+ S + T + FF AIPS +M C+EWW++EI +SG+L Sbjct: 73 VTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGIL 286
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4B3.13 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.880e-12 Identity = 54/234 (23.08%), Postives = 116/234 (49.57%), Query Frame = 2 Query: 23 CNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFK--FGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 +T F++ G+ AL+T+ Q++G+ Y +G + + L I P+ L+W ++ +L+ + QDP A +Y ++ YA+ ++ RF Q Q + P+ + + +I + ++ V+ GFG G +A++ + W +L Y+ + + ++ + A+P +M C E+W+FE++ SG+L ++L + +S+ ++ +L Y ++F Sbjct: 143 ATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYI-MKVNGRQAWGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELAS--MSVLSTTSTLSYNLAF 373
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 7.593e-10 Identity = 67/257 (26.07%), Postives = 100/257 (38.91%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGL------------------------------FGYAIXXXXXXXXXXXXLVL------PMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-------DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643 V +A AF NV G S+ GL A +TL Q++G+ +G + L CLP L++ +L+L QDP V+ + Y M IPGL G +I+ S L P + S + C + + + LV G +G A A S + + L Y+ + LHL+ FF A+PS +M C+EWW++EI + GLL Sbjct: 70 VTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVL-------KKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLL 319
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: ERC1_YEAST (Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.648e-8 Identity = 66/250 (26.40%), Postives = 115/250 (46.00%), Query Frame = 2 Query: 2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGS-YTYCAIICSLPICLPVCLLW-MYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVF--KFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLH-------LKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718 V + + N+TG + + GLC L+TL QAYGA Y+ +G CA+I L LP+ +W ++ +K+L L+ + ++ +A Y G+ G+ + + RF Q Q + + ++ ++LV+ K G G G L++ + W ++ LG + + K R L + F + ++ + AIP VM E+ FE+L + + L L SI + SL Y + F Sbjct: 204 VTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAF-LPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFILFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWNDKIGIGYLGAPLSVVINYW--LMTLGLLIYAMTTKHKERPLKCWNGIIPKEQAFKNWRKMINLAIPGVVMVEAEFLGFEVLTIFASHLGTDAL--GAQSIVATIASLAYQVPF 448 The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
contig sequence >g.raimondii_cottongen_reftransV1_0001112 ID=g.raimondii_cottongen_reftransV1_0001112; Name=g.raimondii_cottongen_reftransV1_0001112; organism=Gossypium raimondii; type=contig; length=720bpback to top |