g.raimondii_cottongen_reftransV1_0001112, g.raimondii_cottongen_reftransV1_0001112 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001112
Unique Nameg.raimondii_cottongen_reftransV1_0001112
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length720
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01chromosomeg.raimondii_cottongen_reftransV1_0001112:1..720 .
Chr01:8966194..8967208 -
n/a
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A061EHE6_THECC (MATE efflux family protein OS=Theobroma cacao GN=TCM_019339 PE=3 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.713e-128
Identity = 203/238 (85.29%), Postives = 213/238 (89.50%), Query Frame = 2
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            AIAT+FCNVTGFSLLWGLCGALETLNGQAYGA QY KLGSYTYCAII +LPICLPVCLLWMYMDKLLVLIGQDPQ A +A RY+M LIP LF YAI+QSQVRFFQSQSLVLPM+F SLATLCFHI VCWVLVFK G G+ G A+AISFS WFNVILLG YMRYS SCEKTR L+L DV LSVKEFF FAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSS SLHY + F
Sbjct:   66 AIATSFCNVTGFSLLWGLCGALETLNGQAYGAMQYQKLGSYTYCAIISTLPICLPVCLLWMYMDKLLVLIGQDPQAAVVACRYSMWLIPALFAYAILQSQVRFFQSQSLVLPMLFISLATLCFHIPVCWVLVFKSGLGNTGAAMAISFSYWFNVILLGLYMRYSSSCEKTRILYLNDVILSVKEFFQFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSTSLHYNVPF 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2TXY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 8.381e-107
Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+FCNVTGFSLL G  GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:   60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2T139_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_008G058000 PE=3 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 3.069e-106
Identity = 171/239 (71.55%), Postives = 200/239 (83.68%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+FCNVTGFSLL G  GA+ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:   60 VAIATSFCNVTGFSLLSGFAGAMETLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 298          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2SVK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058000 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.045e-93
Identity = 153/217 (70.51%), Postives = 181/217 (83.41%), Query Frame = 2
Query:   68 LETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            +ETL GQAYGA QY K GSYTYCAI+C +PICLPVCLL ++MDKLLVL GQDP++A++A RY + LIP LF Y+I+QSQVR+FQ+QSL+LPM+F SLATLCFH+ VCWVLVFK G  + G AL+I  S W NVILLGF+MRYS SCEKTR   LKDVF SVK FF F IPSAVM CLEWWSFEIL+L+SGLLP+++L+TSV+SIC +S SLHY I F
Sbjct:    1 METLCGQAYGAKQYQKFGSYTYCAIMCLIPICLPVCLLSVFMDKLLVLTGQDPEIAKMAWRYGIWLIPALFPYSILQSQVRYFQTQSLILPMLFVSLATLCFHVPVCWVLVFKSGLENTGAALSIGLSYWLNVILLGFHMRYSASCEKTRCFILKDVFSSVKHFFRFGIPSAVMLCLEWWSFEILILLSGLLPDAELQTSVISICFTSSSLHYYIPF 217          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U7DYD6_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0229s00260g PE=4 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.390e-92
Identity = 145/235 (61.70%), Postives = 190/235 (80.85%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHY 706
            V+I  +F  VTGFSLL+GL G LETL GQAYGA QY K G+YTYCAII  LPIC+PV +LW++MD++L+ IGQDP+++ +A RYA CLIP LF YA++QS +R++QSQ L+LPM+FS+ ATLCFHI +CW L+FK+  GS G AL+I  S W NV+ L  YM +S SC+KTR ++   +F S+KEFF FA+PSAVM CLEWW+FE+L+L++GLLP+S+LETSVLSICL++ SLH+
Sbjct:   62 VSIGGSFAGVTGFSLLFGLAGGLETLCGQAYGAGQYQKFGTYTYCAIISLLPICVPVSILWIFMDRILIAIGQDPEISTVACRYATCLIPALFAYAVLQSLLRYYQSQGLILPMLFSTCATLCFHIPLCWALIFKWELGSTGAALSIDVSYWLNVVFLALYMGFSSSCKKTRVIYWNHIFSSIKEFFRFALPSAVMVCLEWWTFELLILLAGLLPDSQLETSVLSICLATTSLHF 296          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D3D4R0_BRAOL (MATE efflux family protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.674e-91
Identity = 144/238 (60.50%), Postives = 180/238 (75.63%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTIS 715
            VA+AT+F NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI  ++PIC  +  LW+YMDKLLV +GQDP ++ +A  YA  LIP LFG AIV    RF  +Q LVLP+++ ++ TL FHI VCW+LVFKFG GS G AL+IS S WF  ++L  Y+R+S SCE TRT    D    VK+FFH+ +PSA M CLEWW FE+L+L SGLLPN KLETSVLSICL++++LHY IS
Sbjct:   67 VALATSFTNVSGFSIMYGLAGALETLCGQAYGAKQYEKLGTYTYSAIASNIPICFLISTLWIYMDKLLVSLGQDPDISRVAGSYAFSLIPALFGQAIVIPLTRFLLTQGLVLPLLYCAVTTLLFHISVCWILVFKFGLGSNGAALSISVSFWFYAVILACYVRFSTSCEMTRTFVSDDFVSCVKQFFHYGVPSAAMLCLEWWLFELLILSSGLLPNPKLETSVLSICLTTETLHYVIS 304          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: R0G4M3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013560mg PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.029e-90
Identity = 146/237 (61.60%), Postives = 179/237 (75.53%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+ATAF NV+GFS+++GL GALETL GQAYGA QY KLG+YTY AI+ ++P CL + +LW YMDKLLV IGQDP ++ +A  YA+CLIP LF  A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC VLV+KFG GS G ALAIS S WFNV++L  Y+R+S SC +TR     D   S K+FF + IPSA MAC+EW  FE LVL SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   72 VALATAFTNVSGFSIMYGLVGALETLCGQAYGAKQYTKLGTYTYSAIVSNVPFCLLISILWFYMDKLLVSIGQDPDISRVAGSYAVCLIPALFSQAVQQPLTRFLQTQGLVLPLLYCAVTTLLFHIPVCLVLVYKFGLGSNGAALAISLSYWFNVLILALYVRFSSSCVETRGFVSDDFVSSAKQFFQYGIPSAAMACIEWSLFEFLVLSSGLLPNPKLETSVLSICLTTGSLHYVI 308          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: A0A0D2N775_GOSRA (MATE efflux family protein OS=Gossypium raimondii GN=B456_001G084200 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.065e-90
Identity = 155/239 (64.85%), Postives = 195/239 (81.59%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            VAIAT+F NVTGFSLL+G+ GALETL GQAYGA QY KLG+YTYC+I+  + ICLPV L W++MD+ L+ +GQDPQ++ +A+ Y++ LIP LF  AI+QS VR+FQSQS +LP+  SS AT+CFH+ +CWVLV K   G  G ALAI+ + WFNVI+LGFYMR+S SCE TRT+ + DVF S+KEF  FA+PSAVM CLEWWSFE+LVL+SGLLP+S+LETSVLSICLS+ SLHY + +
Sbjct:   62 VAIATSFTNVTGFSLLFGMAGALETLGGQAYGAGQYQKLGTYTYCSILSLITICLPVSLFWIFMDEFLIFMGQDPQISHVASIYSIWLIPALFADAILQSLVRYFQSQSQILPLFLSSCATICFHVPLCWVLVHKTNLGYVGAALAITLALWFNVIVLGFYMRWSASCESTRTVIVGDVFASIKEFLGFALPSAVMCCLEWWSFELLVLLSGLLPDSELETSVLSICLSTTSLHYFVPY 300          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: B9SPZ5_RICCO (MATE efflux family protein OS=Ricinus communis GN=RCOM_0467100 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.235e-90
Identity = 147/239 (61.51%), Postives = 190/239 (79.50%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            V++A++F N TGF+LL GL GALETL GQAYGA QY K GSY YCAII  LPICLP  +LW++MD++L+ IG DP+++  A RY++ LIP LFG+AI+QS VR+FQ+QSL+LPM+ SS ATL  HI +CW LVFK+ FG+ GGA++I  S W NVI L  YMR+S SCEKTR L  KDVF S+ EF+ FA+PSAVM CLEWW+FE+L L++G LPNSKLETSVLSIC+++ +++Y + +
Sbjct:   57 VSVASSFTNATGFALLIGLSGALETLCGQAYGAGQYKKFGSYLYCAIISLLPICLPASILWIFMDRILISIGLDPKISMEACRYSIGLIPALFGFAILQSLVRYFQTQSLILPMLISSCATLSAHIPLCWALVFKWEFGAIGGAMSIGLSYWLNVIFLACYMRWSSSCEKTRVLCWKDVFSSISEFWRFALPSAVMVCLEWWTFELLTLLAGFLPNSKLETSVLSICITTTTVNYYVQY 295          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U5FG70_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s10450g PE=4 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 6.210e-90
Identity = 142/220 (64.55%), Postives = 176/220 (80.00%), Query Frame = 2
Query:   20 FCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSI 679
            F +VTGFSLL+GL GALETL GQAYGA QY  + +YTYCAII  + +CLP+  LWM+ DKLL+LIGQDP ++ +A +Y++CLIP LF YAI+Q+ +R+FQ+QSL+LPM+FSS A+LCFHI +CW LVFK   G  G ALAIS S W NVILLG YM+ S  CEKTR++  KDVF  ++EFF FA+PSAVM CLEWWS+E+L+L+SGLL N K ETSVLSI
Sbjct:   23 FTSVTGFSLLFGLAGALETLCGQAYGAEQYQTVRTYTYCAIISLILVCLPISFLWMFTDKLLILIGQDPSISHVARKYSICLIPNLFSYAILQALIRYFQTQSLILPMLFSSFASLCFHITLCWALVFKAEMGIIGAALAISLSYWLNVILLGLYMKCSSECEKTRSVFSKDVFFGIREFFRFAVPSAVMTCLEWWSYEVLILLSGLLRNPKEETSVLSI 242          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.084e-13
Identity = 65/214 (30.37%), Postives = 105/214 (49.07%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A A  NV G S+ +GL  A +TL  Q YG+     +G       +  L  CLP   L++    +L+L  QDP V+ +   Y    IP L    +   QV++  +Q +VLP + + +A    + +  ++ V++   G  G ALA + + +   +LL  Y+  S   + T      +       FF  AIPS +M C+EWW++EI   +SG+L
Sbjct:   73 VTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGIL 286          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4B3.13 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.880e-12
Identity = 54/234 (23.08%), Postives = 116/234 (49.57%), Query Frame = 2
Query:   23 CNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFK--FGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
              +T F++  G+  AL+T+  Q++G+  Y  +G +    +   L I  P+ L+W  ++ +L+ + QDP     A +Y   ++     YA+ ++  RF Q Q +  P+ +     +  +I + ++ V+    GFG  G  +A++ + W    +L  Y+    +  +      ++   +       A+P  +M C E+W+FE++   SG+L  ++L +  +S+  ++ +L Y ++F
Sbjct:  143 ATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYI-MKVNGRQAWGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELAS--MSVLSTTSTLSYNLAF 373          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.593e-10
Identity = 67/257 (26.07%), Postives = 100/257 (38.91%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGL------------------------------FGYAIXXXXXXXXXXXXLVL------PMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-------DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A AF NV G S+  GL  A +TL  Q++G+     +G       +  L  CLP   L++    +L+L  QDP V+ +   Y M  IPGL                               G +I+          S  L      P + S +   C + +  + LV     G +G A A   S +   + L  Y+         + LHL+               FF  A+PS +M C+EWW++EI   + GLL
Sbjct:   70 VTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVL-------KKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLL 319          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: ERC1_YEAST (Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.648e-8
Identity = 66/250 (26.40%), Postives = 115/250 (46.00%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGS-YTYCAIICSLPICLPVCLLW-MYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVF--KFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLH-------LKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            V + +   N+TG + + GLC  L+TL  QAYGA  Y+ +G     CA+I  L   LP+  +W ++ +K+L L+  + ++  +A  Y      G+ G+ + +   RF Q Q +              + ++ ++LV+  K G G  G  L++  + W  ++ LG  +    +  K R L         +  F + ++  + AIP  VM   E+  FE+L + +  L    L     SI  +  SL Y + F
Sbjct:  204 VTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAF-LPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFILFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWNDKIGIGYLGAPLSVVINYW--LMTLGLLIYAMTTKHKERPLKCWNGIIPKEQAFKNWRKMINLAIPGVVMVEAEFLGFEVLTIFASHLGTDAL--GAQSIVATIASLAYQVPF 448          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061EHE6_THECC1.713e-12885.29MATE efflux family protein OS=Theobroma cacao GN=T... [more]
A0A0D2TXY4_GOSRA8.381e-10771.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2T139_GOSRA3.069e-10671.55MATE efflux family protein OS=Gossypium raimondii ... [more]
A0A0D2SVK7_GOSRA1.045e-9370.51Uncharacterized protein OS=Gossypium raimondii GN=... [more]
U7DYD6_POPTR9.390e-9261.70Uncharacterized protein (Fragment) OS=Populus tric... [more]
A0A0D3D4R0_BRAOL3.674e-9160.50MATE efflux family protein OS=Brassica oleracea va... [more]
R0G4M3_9BRAS1.029e-9061.60Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A0D2N775_GOSRA1.065e-9064.85MATE efflux family protein OS=Gossypium raimondii ... [more]
B9SPZ5_RICCO2.235e-9061.51MATE efflux family protein OS=Ricinus communis GN=... [more]
U5FG70_POPTR6.210e-9064.55Uncharacterized protein (Fragment) OS=Populus tric... [more]

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BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
S47A1_RABIT1.084e-1330.37Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
YJ2D_SCHPO2.880e-1223.08Uncharacterized transporter C4B3.13 OS=Schizosacch... [more]
S47A2_HUMAN7.593e-1026.07Multidrug and toxin extrusion protein 2 OS=Homo sa... [more]
ERC1_YEAST1.648e-826.40Ethionine resistance-conferring protein 1 OS=Sacch... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001112 ID=g.raimondii_cottongen_reftransV1_0001112; Name=g.raimondii_cottongen_reftransV1_0001112; organism=Gossypium raimondii; type=contig; length=720bp
TGTTGCCATCGCCACAGCTTTCTGCAATGTCACTGGCTTTAGTCTCCTTT
GGGGACTTTGTGGTGCACTCGAAACCCTAAACGGACAAGCATATGGGGCA
ACGCAATACTATAAACTAGGAAGCTACACTTATTGTGCCATAATATGTTC
CCTTCCAATTTGTCTCCCGGTGTGTCTCCTATGGATGTATATGGACAAAC
TATTAGTGCTAATAGGTCAAGACCCTCAAGTTGCAGAGATAGCTAATAGA
TACGCCATGTGTCTCATACCTGGATTATTTGGTTACGCCATTGTTCAATC
ACAAGTTCGTTTCTTCCAATCCCAGAGCTTGGTTCTTCCTATGATGTTTA
GTTCTCTTGCAACATTGTGTTTCCATATAATTGTTTGTTGGGTTTTGGTA
TTCAAATTTGGGTTTGGAAGCAAAGGAGGGGCATTGGCTATCAGTTTCTC
GAATTGGTTTAATGTTATATTGCTTGGGTTTTACATGAGATACTCACCTT
CATGTGAGAAAACCCGAACCCTCCATTTGAAAGATGTTTTCTTGAGTGTC
AAGGAGTTCTTTCATTTTGCCATACCTTCTGCAGTAATGGCTTGCCTCGA
ATGGTGGTCGTTCGAGATTCTTGTATTAATGTCTGGACTTCTGCCAAATT
CCAAGCTTGAAACATCGGTTCTTTCTATATGCCTTTCAAGTGATTCTTTG
CATTATACTATATCGTTTGG
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