g.raimondii_cottongen_reftransV1_0000748, g.raimondii_cottongen_reftransV1_0000748 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0000748
Unique Nameg.raimondii_cottongen_reftransV1_0000748
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length2114
Homology
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Match: V7BMV3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G110900g PE=4 SV=1)

HSP 1 Score: 943.34 bits (2437), Expect = 0.000e+0
Identity = 447/586 (76.28%), Postives = 513/586 (87.54%), Query Frame = -3
Query:  220 MIEKMEL-LDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGRTDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGEVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1974
            M+EK+E   +++K+IEEFE ++KDA  VQRETLKKILE+N  AEYLQ+LGLNGRTDPESFKACVPLVTH +L+PYI RI+DG +SPILTGK ITT+SLSSGTTQGKPK+VP+NDEL ETT+QIY+TS+AFR REFPI+NGKAL  IY SKQ KTKGGL A TAT+NVFRN+ +K  M+A+QSQCCSPDEVIFGPDF QSLYCHLLCGLIFREE+QF+SSTF+HSIVHAFRTFEQVWEELC DIREGVLTSR+T PS+R AM+KLLKPN +LA+LIHKKC GL+NWYGLIPELFPN KYIYGIMTGSME YLKKLRHYAG++PL++ADYGSSEGWI AN+NP  P E  TYAVLP+IGYFEFIPL     +  + RG+ + L ++ +PVSLTEVK+GEEYEV++T+ AGLYRYRLGDVVKVMGFHNSTPELKFI R  L+L +NIDKNTEKDLQ AVE AAKL+AEEK EV+DFSSHVD+  +PGHYVIFWEISGE S+E+L ECCNCLD+SFVDAGY SSRKVN IG LELR++RRGTFQK+LDHYLGLG AVSQ+KTPRCVG TN  VLQIL +NV   Y STAF
Sbjct:    1 MLEKVEEEFNMEKVIEEFELLSKDAERVQRETLKKILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHKELEPYIYRIIDGDASPILTGKRITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFRNAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCIDIREGVLTSRVTVPSIRMAMSKLLKPNSKLANLIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPQHPPECATYAVLPHIGYFEFIPLS----DLDNTRGEPDFLCIDSQPVSLTEVKVGEEYEVVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSTLLLNINIDKNTEKDLQLAVEAAAKLLAEEKVEVVDFSSHVDLSEEPGHYVIFWEISGEASEELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVGLTNAMVLQILGENVVNNYLSTAF 582          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Match: D7UCL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01280 PE=4 SV=1)

HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 449/587 (76.49%), Postives = 509/587 (86.71%), Query Frame = -3
Query:  220 VTMIEKMELLDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGRTDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGEVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1980
            V M+EKME    +K+IEEFE +TKDAG VQRETLKKILE+N  AEYLQ  GLNGRTDPES++ACVPLVTH DL PYI+RI DG +SP+LTGKPI T+SLSSGTTQGK K+VPFNDEL+ETTLQIYRTS+AFR REFP+ NG ALQ IY SKQ KT+GGL AGTATTNVF +SQFK TMKA++S CCSPDEVIFGPDF QSLYCHLLCGLI   EIQ +SSTF+HSIV+AFRTFEQVWE+LCADI++GVLT  +T PS+R+ M+KLLKPNPELA+ I+KKC GL+NWYG+IP LFPNVKY+YGIMTGSME YLKKLRHYAGDVPL+SADYGSSEGWIGANINP +P E  TYAVLPNIGYFEFIPL+ + EE   DR D    S E KPV LTEVKIGEEYE+IVT+FAGLYRYRLGDVVK+ GFHN TPEL+F+CRRNL+LT+NIDKNTEKDLQ AVE AA+++A EK EVIDF+S VD  TDPGHYVIFWEISGEVS EV  ECCNCLDRSFVDAGY+SSRKVN+IGPLEL+++RRGTFQK+LDHYLG+G  +SQ+KTPRCV P N  VLQIL  NV K++FSTAF
Sbjct:   64 VKMLEKMEEFKAEKVIEEFEELTKDAGRVQRETLKKILEDNASAEYLQKQGLNGRTDPESYQACVPLVTHADLVPYIKRIADGDTSPVLTGKPIKTMSLSSGTTQGKQKYVPFNDELLETTLQIYRTSFAFRNREFPVRNGMALQFIYGSKQFKTEGGLFAGTATTNVFSSSQFKTTMKAIESPCCSPDEVIFGPDFRQSLYCHLLCGLIHHNEIQLVSSTFAHSIVYAFRTFEQVWEQLCADIQDGVLTKDVTVPSIRAVMSKLLKPNPELAEWIYKKCSGLSNWYGVIPALFPNVKYVYGIMTGSMEPYLKKLRHYAGDVPLLSADYGSSEGWIGANINPKLPPELATYAVLPNIGYFEFIPLRGSAEE---DRQDKIQSSFESKPVGLTEVKIGEEYEIIVTNFAGLYRYRLGDVVKIAGFHNMTPELQFVCRRNLLLTINIDKNTEKDLQLAVEAAAEVLAPEKVEVIDFTSQVDKSTDPGHYVIFWEISGEVSVEVSSECCNCLDRSFVDAGYISSRKVNSIGPLELKLVRRGTFQKILDHYLGIGGVLSQYKTPRCVNPNNNMVLQILYSNVVKSHFSTAF 647          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Match: A0A0B2SDF9_GLYSO (Putative indole-3-acetic acid-amido synthetase GH3.5 OS=Glycine soja GN=glysoja_001698 PE=4 SV=1)

HSP 1 Score: 940.643 bits (2430), Expect = 0.000e+0
Identity = 438/585 (74.87%), Postives = 511/585 (87.35%), Query Frame = -3
Query:  220 MIEKMELLDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGRTDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGEVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1974
            M+EK+E  ++DK+I+EFE +T+DA  VQRETLK+ILE+N  AEYLQ+LGLNGRTDPESFKACVP+VTH +L+PYI RI+DG +SPILTGKPITT+SLSSGTTQGKPK+VP+NDEL ETT+QIY+TS+ FR REFPI+NGKAL  IY SKQ KTKGGL A TAT+NVF ++ +K  M+A+QSQCCSPDEVIFGPDF QSLYCHLLCGLIFREE+QF+SSTF+HSIVHAFRTFEQVWEELC DIREGVLT  +T PS+R AM+KLLKPNPELA+ IH+KC GL+NWYGLIPELFPN KYIYGIMTGSME YLKK+RHYAG++PL++ADYGSSEGWI AN+NP +P E  TYAVLP+IGYFEFIPL E      + +G+ + L ++PKP+ LTEVK+GEEYE+++T+ AGLYRYRLGDVVKVMGFHNSTPELKFI R +L+L +NIDKNTEKDLQ AVE A KL+AEEK EV+DFSS VD+  +PGHYVIFWEISGE S E+L ECCNCLD+SFVDAGY SSRKVN IG LELR++RRGTFQK+LDHYLGLG AVSQ+KTPRCVGPTN +VLQIL +NV   Y STAF
Sbjct:    1 MLEKVEEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPMVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFVFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTRNVTIPSIRMAMSKLLKPNPELANTIHQKCRGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFIPLSEF----ENTKGEPDFLCVDPKPMGLTEVKVGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGEASQELLLECCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTRVLQILSENVVNNYLSTAF 581          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Match: M0ZGG1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401000095 PE=4 SV=1)

HSP 1 Score: 939.488 bits (2427), Expect = 0.000e+0
Identity = 433/578 (74.91%), Postives = 505/578 (87.37%), Query Frame = -3
Query:  220 LDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGRTDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGEVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1953
             D +++IEEFE++TK+AG VQ ETLKKILEENG   YLQ  GLNGRTDPE FKACVPLVTH DL+PYIQRI DG  SP+LTGKPITTISLSSGTTQG+PKFVPFNDELME+T+QIY+TS+AFR REFPIENGKALQ IYSSKQ KTKGGL AGTATTNV+RN+ FK TMKAMQ+ CCSPDEVIFGPDFHQSLYCHLLCGLIFR+E+Q +SSTF+HSIVHAFRTFEQVWEEL ADIREGV++SR+T PS+RSA+ KL+KP+PE AD I+ KC GL+NWYGLIP LFPN +YIYGIMTGSME YLKKLRHYAG++PL+SADYGSSEGWIGAN+NP +P E  TYAVLPNIGYFEFIPL+ N++             +EP PV L EVK+ EEYE++VT+FAGLYRYRLGDVVK+ GFHN+TPEL+FICR NL+L++NIDKNTEKDLQ AVE AA+L+ +EK EV+DF+SH ++ TDPGHYV+FWE+SGE SDE+L+ECCNCLD+SFVDAGYV SRKVN IG LELRI+++GTF K+LDH++GLG AVSQFKTPRCVG  N ++LQILC +V K+YFSTA+
Sbjct:    3 FDPEEVIEEFEALTKEAGKVQEETLKKILEENGSTVYLQQWGLNGRTDPEIFKACVPLVTHKDLEPYIQRIADGDLSPVLTGKPITTISLSSGTTQGRPKFVPFNDELMESTMQIYKTSFAFRNREFPIENGKALQFIYSSKQFKTKGGLAAGTATTNVYRNAHFKKTMKAMQTPCCSPDEVIFGPDFHQSLYCHLLCGLIFRDEVQVVSSTFAHSIVHAFRTFEQVWEELVADIREGVISSRVTVPSMRSAIMKLVKPDPEQADTIYNKCSGLSNWYGLIPVLFPNARYIYGIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWIGANVNPKLPPELVTYAVLPNIGYFEFIPLRVNLD------------GLEPAPVGLAEVKLDEEYEIVVTNFAGLYRYRLGDVVKIKGFHNATPELQFICRSNLLLSINIDKNTEKDLQLAVEAAARLLVDEKLEVVDFTSHGNVATDPGHYVVFWELSGEGSDEILQECCNCLDKSFVDAGYVGSRKVNVIGALELRIVKKGTFHKILDHFVGLGGAVSQFKTPRCVGQNNSRLLQILCYDVVKSYFSTAY 568          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Match: I1NCI9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 937.176 bits (2421), Expect = 0.000e+0
Identity = 438/585 (74.87%), Postives = 509/585 (87.01%), Query Frame = -3
Query:  220 MIEKMELLDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGRTDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGEVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1974
            M+EK+   ++DK+I+EFE +T+DA  VQRETLK+ILE+N  AEYLQ+LGLNGRTDPESFKACVPLVTH +L+PYI RI+DG +SPILTGKPITT+SLSSGTTQGKPK+VP+NDEL ETT+QIY TS+ FR REFPI+NGKAL  IY SKQ KTKGGL A TAT+NVF ++ +K  M+A+QSQCCSPDEVIFGPDF QSLYCHLLCGLIFREE+QF+SSTF+HSIVHAFRTFEQVWEELC DIREGVLT  +T PS+R AM+KLLKPNPELA+ IH+KC GL+NWYGLIPELFPN KYIYGIMTGSME YLKK+RHYAG++PL++ADYGSSEGWI AN+NP +P E  TYAVLP+IGYFEFIPL E      + +G+ + L ++PKP+ LTEVK+GEEYE+++T+ AGLYRYRLGDVVKVMGFHNSTPELKFI R +L+L +NIDKNTEKDLQ AVE A KL+AEEK EV+DFSS VD+  +PGHYVIFWEISGE S E+L ECCNCLD+SFVDAGY SSRKVN IG LELR++RRGTFQK+LDHYLGLG AVSQ+KTPRCVGPTN +VLQIL +NV   Y STAF
Sbjct:    1 MLEKVGEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYLTSFVFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTRNVTIPSIRMAMSKLLKPNPELANTIHQKCRGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFIPLSEF----ENTKGEPDFLCVDPKPMGLTEVKVGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGEASQELLLECCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTRVLQILSENVVNNYLSTAF 581          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Match: GH39_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica GN=GH3.9 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.498e-95
Identity = 163/453 (35.98%), Postives = 263/453 (58.06%), Query Frame = -3
Query:  220 IYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAK-LIAEEKQEVIDFSSHVDMWTDPGHYVIFWEISGE----------VSDEVLKECCNCLDRSFVDAGYVSSRKVN-AIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQILCDNVFKTYFSTAF 1542
            ++   ++KT+GGL A  A T+V+++ QFK+    M     SP   I   D  QS+Y  ++CGL  R ++    + F+ ++V A R  +  W +L ADI  G L   +  PSVR A++ +L+ + ELA+ +  +C    +W G+I  ++PN KY+  I+TG+M  Y++ L++Y+G +P++S  Y SSE + G N+ P       +Y ++PN  YFEF+P+ E V        DA  L      V L  V++G EYEV++T++AGL RYR+GDV++V GFHN+ P+ +F+ R++++L+V +DK  E +L +AVE A+  L+      V +++S       PGHYV++WE+  E          V  E L  CC  ++ +   A Y   R  + +IGPLE+RI+R GTF++V+D  +  G ++ Q+K P+CV  T   V+++L   V  + FS A 
Sbjct:    1 MFVKSETKTRGGLTAWFALTSVYKSEQFKS----MAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIEC-SKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVGEVV--------DATNL------VDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEAL-SAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCV--TVPSVVELLDSRVVSSQFSPAL 431          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Match: GH310_ORYSJ (Putative indole-3-acetic acid-amido synthetase GH3.10 OS=Oryza sativa subsp. japonica GN=GH3.10 PE=3 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.333e-88
Identity = 164/477 (34.38%), Postives = 257/477 (53.88%), Query Frame = -3
Query:  520 KLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQNLGLNGR-TDPESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPF-NDELMETTLQIYRTSYAFRTREFPIENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAK-LIAEEKQEVIDFSSHVDMWTDPGHY 1941
            +LIEE   +T +   VQ   L +IL  N  AEYL   GL+   TD  +F+A VP+ +++DL+PY++RI +G  SPIL+  PI     SSGT+ G+ K +P   DE+    +     +         +  GK L  +++  ++KT GGL A  A T+V+++  FK           SP   I   D  QS+Y  +LCGL  R ++  + + F+ ++V A R  +  W +L ADI  G L  R+T PS R                   +C    +W G++  L+P  K +  ++TG M  Y+  L++Y+G +P++S  Y SSE + G N+ P       +Y ++PN  YFEF+P+ E V        DA+ L      V L  V+ G EYEV+VT++AGL RYR+GDV+ V GFHN+ P+ +F+ R++++L++  DK  E +LQ+AVE A+  L+      +++++S       PGH+
Sbjct:   33 RLIEE---LTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDDLKPYVKRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEMARREVLSSLATSVLNVYVPGLHTGKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKRAYAYT-----SPMAAILCEDASQSMYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVTDPSDR-------------------EC-SRGDWTGIVTRLWPKTKCLNVVVTGVMAQYIPTLQYYSGGLPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLPVGEAV--------DASNL------VELARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQRAVERASSALLRPRGASIVEYTSRACTERVPGHF 467          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Match: GH313_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.13 OS=Oryza sativa subsp. japonica GN=GH3.13 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.739e-68
Identity = 139/420 (33.10%), Postives = 226/420 (53.81%), Query Frame = -3
Query:  754 MIEKMELLDVDKLIEEFESMTKDAGNVQRETLKKILEENGCAEYLQN------LGLNGRTD--PESFKACVPLVTHNDLQPYIQRIVDGSSSPILTGKPITTISLSSGTTQGKPKFVPFNDELMETTLQIYRTSYAFRTREFP-IENGKALQLIYSSKQSKTKGGLIAGTATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREG-VLTSRITFPSVRSAMAKLL--KPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVE-EQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAG 1974
            MI   +  D    +E  E +T  A  VQR  L ++L  N   +YL+       +   G  D    +FK  VP+V + D++PYI+RI +G+ S +++ KPIT +  SSGT+ G+PK +P  +E ++    +Y        +    ++ G+ + L++   +  T  G++A    T+ +++  F+    +  ++  SPD  I  PD  QS+Y  LLCGL  R E+  + + F+ + + A +  E  W  LCADIR G    + +T  + R A+  +L  + +P+LAD I  +C G  +W G++  L+P  KYI  I+TGSM  Y+  L  Y G +PL+S  Y SSE + G N+ P  P E   Y +LPN+ Y+EFI ++++ + E+V D G+          V L  V++G  YE++VT+F G
Sbjct:   34 MIPACDPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGEDELAAAFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELDRKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRPDSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGG-ASWRGIVRRLWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLPNMCYYEFIKVEKDGDGEKVRD-GEV---------VDLVGVEVGAYYELVVTTFTG 442          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Match: GH36_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.6 OS=Oryza sativa subsp. japonica GN=GH3.6 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.558e-62
Identity = 141/418 (33.73%), Postives = 224/418 (53.59%), Query Frame = -3
Query:  289 TATTNVFRNSQFKNTMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREG-VLTSRITFPSVRSAMAK--LLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLRHYAGD-VPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEKDLQQAVEEAAKLIAEEKQEVIDFSSHVDMWTDPGH-----YVIFWEISG-------EVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVG 1494
             AT    R+S  +     M S C SP EVI G D  Q +YCHLLCGL   + +  I + ++ ++  A R  +  W +LC D+  G V    +T  ++R A+    L  P PELA  + + C   ++W G++ +L+P+ +YI  + TG+ME Y   ++H+AG+ +P++  DY +SE  IG N+    P E TTY +LP   YFEFIP          D   A   +   +PV +  V+ G+ YE++ T+F GLYRY++GDVVK+ GFH+S+P L+F+ R       + +  TE+D+  A+ +  +L+ ++  EVI+F++ + +  D G        I  E+S        E S   L+ C   L+   +   Y  SR    + PLE+ ++R GTF ++ +  +  GA  +Q+K PR  G
Sbjct:    2 AATAWGIRSSGIRGASPVM-SACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRIC-ERDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIPF---------DMDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTRAPPPQE-HGEVLTERDVMAAM-DTFQLMLKDGGEVIEFAAFI-IDGDGGQRRRRCATIAVEVSNGSKLLDHERSAAFLRRCTAPLE-GCLGGAYRLSRATGDVAPLEVAVVRPGTFDRLAEAAIRGGAPANQYKPPRSSG 404          
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Match: GHDC_MOUSE (GH3 domain-containing protein OS=Mus musculus GN=Ghdc PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.886e-19
Identity = 92/380 (24.21%), Postives = 166/380 (43.68%), Query Frame = -3
Query:  262 LLCGLIFREEIQFISSTFSHSIVHAFRTFEQVWEELCADIREGVLTSRITFPSVRSAMAKLLKPNPELADLIHKKCLGLNNWYGLIPELFPNVKYIYGIMTGSMEHYLKKLR-HYAGDVPLISADYGSSEGWIGANINPNVPTESTTYAVLPNIGYFEFIPLKENVEEQVHDRGDANILSMEPKPVSLTEVKIGEEYEVIVTSFAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLMLTVNIDKNTEK----DLQQAVEE--AAKLIAE--EKQEVIDFSSHVDMWTDPGHYVIFWEISG--EVSDEVLKECCNCLDRSFVDAGYVSSRKVNAIGPLELRILRRGTFQKVLDHYLGLGAAVSQFKTPRCVGPTNYKVLQI 1368
            LL   +    ++ + +  +  ++  F   E   EEL   I  G+L +    P   + + + L+  P                 GL   L+P ++ +  + +G     +  LR  +   +   S  Y +S G +  N+ P  P  S  Y + P + + E +P+KE  +E+                + LT+ +  +EYE+++T+   L R RLGDVV+V+G +N  P ++F CR    L V  +   E      L QAV +   AKL+     +  V+D            HY +F E+ G   +S+E   +  NCL  +   A Y S R   ++GP ++ ++R G+F+ + +       A++ F +  C  P   +V+++
Sbjct:  186 LLLEALISPGLRVLEARTAVELLDVFVGLEADGEELAEAIAAGILGT--LLPKRAAELKEALEQGPR----------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASGGVVALNLWPERPQGS--YLLPPGVPFIELLPIKEGTQEEAAST------------LLLTDAQREKEYELVLTNHTSLTRCRLGDVVQVVGTYNQCPVVRFTCRLGQTLNVRGEVTDETVFSVALAQAVGQWPGAKLLDHVCVESRVLDSCE-----GSAPHYEVFVELRGLRNLSEENRDKLDNCLQEA--SAQYKSLRFRGSVGPAKVHLVRPGSFRVLRE-------ALAAFSSSSCRPPEMPRVIRL 519          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7BMV3_PHAVU0.000e+076.28Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
D7UCL7_VITVI0.000e+076.49Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A0B2SDF9_GLYSO0.000e+074.87Putative indole-3-acetic acid-amido synthetase GH3... [more]
M0ZGG1_SOLTU0.000e+074.91Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
I1NCI9_SOYBN0.000e+074.87Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of g.raimondii_cottongen_reftransV1_0000748 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GH39_ORYSJ3.498e-9535.98Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH310_ORYSJ3.333e-8834.38Putative indole-3-acetic acid-amido synthetase GH3... [more]
GH313_ORYSJ3.739e-6833.10Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH36_ORYSJ3.558e-6233.73Probable indole-3-acetic acid-amido synthetase GH3... [more]
GHDC_MOUSE1.886e-1924.21GH3 domain-containing protein OS=Mus musculus GN=G... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 469..493
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
IPR004993GH3 familyPFAMPF03321GH3coord: 41..586
e-value: 3.5E-194
score: 646.4
IPR004993GH3 familyPANTHERPTHR31901FAMILY NOT NAMEDcoord: 10..610
IPR031110Jasmonic acid-amido synthetase JAR1PANTHERPTHR31901:SF3JASMONIC ACID-AMIDO SYNTHETASE JAR1coord: 10..610

Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0000748 ID=g.raimondii_cottongen_reftransV1_0000748; Name=g.raimondii_cottongen_reftransV1_0000748; organism=Gossypium raimondii; type=contig; length=2114bp
AGTTAACAAGGTGGTTTTTATAGATTAAAATCAAAAGTCACGACATCCAA
TTCATATGATATAGTTTAACAATTGCAATTGGTGAAGCAAATTAAAATAT
AAGGTTGTGGAATCGAGCTGATCCTCCTTCACATCCAATGAACAACTTTT
GATTATTATTATTTTTATATTAAGAAAAATGGCGAGTTTTAATGGGAAAA
ATATATTTAACAACATCTAGAAAGCAGTACTAAAGTAGGTCTTGAAAACA
TTGTCGCACAAGATCTGCAACACTTTATAGTTAGTAGGCCCTACGCATCG
TGGTGTTTTAAATTGGCTAACAGCAGCCCCTAACCCTAAGTAATGATCCA
AAACCTTCTGAAACGTTCCCCTCCTAAGAATTCGGAGCTCAAGGGGACCA
ATCGCGTTCACCTTCCGGGAACTAACATACCCTGCATCCACAAATGAACG
ATCCAAACAATTGCAGCATTCTTTCAGCACTTCATCGCTTACTTCCCCAC
TTATTTCCCAAAATATCACGTAGTGACCGGGGTCGGTCCACATGTCCACA
TGGCTCGAGAAATCTATCACTTCCTGCTTTTCCTCCGCAATCAACTTGGC
TGCTTCTTCCACTGCTTGCTGCAAATCCTTCTCAGTGTTTTTGTCGATGT
TTACGGTCAGCATCAGGTTTCTTCTGCATATAAATTTCAGTTCCGGGGTT
GAGTTATGGAACCCCATGACCTTCACCACATCCCCTAGCCTATACCTGTA
TAACCCTGCAAAACTTGTGACAATAACCTCATACTCTTCACCGATTTTAA
CTTCAGTCAGACTCACTGGTTTGGGCTCCATCGAGAGGATATTAGCATCA
CCTCTGTCATGGACTTGCTCTTCAACATTCTCTTTCAGAGGAATGAACTC
AAAATAGCCAATATTTGGAAGAACAGCATAAGTAGTAGACTCTGTAGGCA
CATTTGGGTTGATATTTGCCCCAATCCACCCCTCAGAAGAACCATAATCA
GCACTTATAAGAGGCACATCCCCCGCATAATGCCTTAATTTCTTCAGATA
ATGCTCCATGGACCCAGTCATGATCCCATAGATGTATTTGACATTAGGGA
AAAGCTCCGGTATCAGTCCGTACCAGTTATTCAGTCCCAAGCATTTCTTG
TGAATCAAATCAGCTAGTTCGGGATTTGGCTTCAGCAATTTGGCCATCGC
TGATCGGACCGAAGGGAACGTGATCCGGCTTGTCAATACCCCTTCCCTTA
TGTCAGCACAAAGCTCTTCCCAAACTTGCTCGAACGTTCGAAATGCATGA
ACAATGCTATGGGAAAAGGTGGACGAAATGAACTGAATTTCTTCGCGGAA
AATCAGCCCACACAAGAGATGGCAGTACAAGGATTGGTGGAAATCAGGAC
CAAATATCACTTCATCAGGGCTGCAACACTGTGACTGCATCGCTTTCATT
GTGTTCTTGAACTGTGAATTGCGAAAGACATTGGTAGTCGCCGTTCCGGC
AATCAAACCCCCTTTGGTTTTGCTTTGTTTGCTACTGTAAATGAGCTGCA
AAGCCTTCCCATTCTCAATAGGAAATTCTCTTGTTCTAAAAGCATATGAA
GTACGGTAAATCTGCAAAGTAGTTTCCATTAATTCGTCATTGAAAGGCAC
AAATTTGGGCTTTCCTTGAGTAGTCCCAGAGCTGAGAGAAATGGTGGTGA
TTGGTTTTCCAGTAAGAATCGGAGAGGAAGAACCATCGACAATTCGTTGA
ATATAAGGCTGCAAGTCATTGTGAGTGACGAGAGGAACACAAGCTTTGAA
GCTTTCAGGGTCGGTTCTGCCATTGAGGCCCAGATTTTGCAGATATTCAG
CACATCCATTTTCTTCTAAAATCTTCTTTAAAGTCTCCCTTTGAACATTC
CCGGCATCTTTTGTCATCGATTCAAACTCTTCTATCAGTTTATCCACGTC
CAGAAGTTCCATCTTTTCTATCATCGTTACTGAAACTCTCGAAAATCCGA
ATCTAGAAATCTCCCTTCTCTCAGCAGCTTTAGAGCATGAATTAAACAAC
TCTCAATTGAGGAAAAAAAAGGAGGAGCAGAAAGAGAGGTTCTAAAAGAA
AAAAAGAAAAAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004993GH3
IPR031110JAR1
Vocabulary: Biological Process
TermDefinition
GO:0009864induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009694jasmonic acid metabolic process
GO:0009611response to wounding
Vocabulary: Molecular Function
TermDefinition
GO:0080123jasmonoyl-L-amino acid ligase activity