AF061088.1.m1

Transcript Overview


Name	AF061088.1.m1
Unique Name	AF061088.1.m1
Type	mRNA
Organism	Gossypium robinsonii (Gossypium robinsonii)
Source	genbank
Product	P-glycoprotein
Genbank Note	similar to P-glycoprotein in Hordeum vulgare and Arabidopsis thaliana

Cross References

External references for this mRNA


Database	Accession
nuccore	AF061088.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
AF061088	region	AF061088:22..894 +	NCBI Cotton Data	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Cotton Data	2021-06-16

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AF061088.1.m1-cds1	AF061088.1.m1-cds1	Gossypium robinsonii	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
AF061088.1.p1	AF061088.1.p1	Gossypium robinsonii	polypeptide

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AF061088:22..894+
coding sequence from alignment at AF061088:22..894+

mRNA sequence

>AF061088.1.m1 ID=AF061088.1.m1; Name=AF061088.1.m1; organism=Gossypium robinsonii; type=mRNA; length=873bp
acgccgttgcctaatatcgaaagtccgaaaccagtatctcatccccctcc
ttccttccgtaggcttctctctctaaattccccagaatggaagcatggtt
tgatgggtagcctctcggctatagtttttggagctgttcaacctgtttat
gctttaaccattggtggaatgatttcagccttttttgcaaaaagtcacca
agaaatgcaggctcgaatacgcacttacgctttcatattttctttgctca
cattgctctctgtcattctcaatcttattcagcattataattttgcttac
atgggcgagcggttaaccaggagaatccgaagtcgaatgctggaaaaaat
attgtccttcgaagccgcttggtttgatgaagaaaaaaactctactggag
ctttatgctcgagtttgagcaatcaggcttcgatggttaagacactcgtc
gcagaccgaatctctttgttagttcaaaccacatctgctgttaccatcgc
gatgattatcgggctagtcgtggcttggaagttagcaatagtgatgattg
cagtccaacctctcgcaattatgtgtttctacacacgaaaagttttgctt
tctagcatttcaactaatttcgtcaaggcacaaaatcaaagtactcaaat
agcagtggaagctgtgtataatcatagaattgtaacttcatttgggagcc
taggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaa
gaggctaggaaaaaatcatggctagcggggattggtatggggtcagctca
aagcctaacatttatgtcatgggctttagatttttggtatggaggtgcat
tggttcaaaagggagagatatca

protein sequence of AF061088.1.p1

>AF061088.1.p1 ID=AF061088.1.p1; Name=AF061088.1.p1; organism=Gossypium robinsonii; type=polypeptide; length=291bp
TPLPNIESPKPVSHPPPSFRRLLSLNSPEWKHGLMGSLSAIVFGAVQPVY
ALTIGGMISAFFAKSHQEMQARIRTYAFIFSLLTLLSVILNLIQHYNFAY
MGERLTRRIRSRMLEKILSFEAAWFDEEKNSTGALCSSLSNQASMVKTLV
ADRISLLVQTTSAVTIAMIIGLVVAWKLAIVMIAVQPLAIMCFYTRKVLL
SSISTNFVKAQNQSTQIAVEAVYNHRIVTSFGSLGKVLQLFDEAQEEPRK
EARKKSWLAGIGMGSAQSLTFMSWALDFWYGGALVQKGEIS

mRNA from alignment at AF061088:22..894+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AF061088.1.m1 ID=AF061088.1.m1; Name=AF061088.1.m1; organism=Gossypium robinsonii; type=mRNA; length=873bp; location=Sequence derived from: AF061088:22..894+ (Gossypium robinsonii
acgccgttgcctaatatcgaaagtccgaaaccagtatctcatccccctcc
ttccttccgtaggcttctctctctaaattccccagaatggaagcatggtt
tgatgggtagcctctcggctatagtttttggagctgttcaacctgtttat
gctttaaccattggtggaatgatttcagccttttttgcaaaaagtcacca
agaaatgcaggctcgaatacgcacttacgctttcatattttctttgctca
cattgctctctgtcattctcaatcttattcagcattataattttgcttac
atgggcgagcggttaaccaggagaatccgaagtcgaatgctggaaaaaat
attgtccttcgaagccgcttggtttgatgaagaaaaaaactctactggag
ctttatgctcgagtttgagcaatcaggcttcgatggttaagacactcgtc
gcagaccgaatctctttgttagttcaaaccacatctgctgttaccatcgc
gatgattatcgggctagtcgtggcttggaagttagcaatagtgatgattg
cagtccaacctctcgcaattatgtgtttctacacacgaaaagttttgctt
tctagcatttcaactaatttcgtcaaggcacaaaatcaaagtactcaaat
agcagtggaagctgtgtataatcatagaattgtaacttcatttgggagcc
taggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaa
gaggctaggaaaaaatcatggctagcggggattggtatggggtcagctca
aagcctaacatttatgtcatgggctttagatttttggtatggaggtgcat
tggttcaaaagggagagatatca

Coding sequence (CDS) from alignment at AF061088:22..894+

>AF061088.1.m1 ID=AF061088.1.m1; Name=AF061088.1.m1; organism=Gossypium robinsonii; type=CDS; length=873bp; location=Sequence derived from: AF061088:22..894+ (Gossypium robinsonii
acgccgttgcctaatatcgaaagtccgaaaccagtatctcatccccctcc
ttccttccgtaggcttctctctctaaattccccagaatggaagcatggtt
tgatgggtagcctctcggctatagtttttggagctgttcaacctgtttat
gctttaaccattggtggaatgatttcagccttttttgcaaaaagtcacca
agaaatgcaggctcgaatacgcacttacgctttcatattttctttgctca
cattgctctctgtcattctcaatcttattcagcattataattttgcttac
atgggcgagcggttaaccaggagaatccgaagtcgaatgctggaaaaaat
attgtccttcgaagccgcttggtttgatgaagaaaaaaactctactggag
ctttatgctcgagtttgagcaatcaggcttcgatggttaagacactcgtc
gcagaccgaatctctttgttagttcaaaccacatctgctgttaccatcgc
gatgattatcgggctagtcgtggcttggaagttagcaatagtgatgattg
cagtccaacctctcgcaattatgtgtttctacacacgaaaagttttgctt
tctagcatttcaactaatttcgtcaaggcacaaaatcaaagtactcaaat
agcagtggaagctgtgtataatcatagaattgtaacttcatttgggagcc
taggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaa
gaggctaggaaaaaatcatggctagcggggattggtatggggtcagctca
aagcctaacatttatgtcatgggctttagatttttggtatggaggtgcat
tggttcaaaagggagagatatca

Search form