fiber uniformity

QTL Overview
QTL LabelqFU.PA-F2_ch05.pop15-08.2
Published SymbolqUI-5-1.BC3F2:3.pop15.NAU3498
Trait Namefiber uniformity
Trait AliasN/A
Trait StudyPA-F2-2017
PopulationPD 94042 x (AD)4-08, F2
Female ParentPD 94042
Male Parent(AD)4-08
Colocalizing MarkerNAU3498
Neighboring MarkerN/A
EnvironmentN/A
LODN/A
Additivity Dominance Ratio0.12
R28.52
CommentsN/A
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:30625509..30625772 .Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1CottonGen QTL alignment to genome using associated markers
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1PD 94042 x (AD)4-08, F2 (2016)AD_ch05_At.05N/AN/A190189191View
Sequences
The following sequences are available for this feature:

QTL from alignment at D05:30625509..30625772

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qFU.PA-F2_ch05.pop15-08.2 ID=qFU.PA-F2_ch05.pop15-08.2; Name=fiber uniformity; organism=Gossypium hirsutum x mustelinum; type=QTL; length=264bp; location=Sequence derived from: D05:30625509..30625772 (Gossypium hirsutum
TGATTCTCTTTGGGTTCCATAGATTCCATTAACGAAAATTCCAGGAGTGC
AGAAACTGCCATTGTTGTCGCGGATGATGGTGGTGGTGGTGGTGTGGTGA
TGGTGGTGGTGGTGGTTGTCGTCGACGACCAACGATCTTGAGTCATTCTA
GTTGAATTCTCAGTAACATTTCTAGTTGAATTCTCAGTAACATTTGCATG
GTTTGGACCAAAATCGTTATGCCGCCTTCTCTTGTGCCCGAATAGAGATA
AGGGTGCTTCTCGA
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