|
|
Overview
| Analysis Name | BLASTx of JGI Gossypium raimondii transcripts vs NCBI nr |
|---|
| Method | BLAST (2.9.0+). blastx |
|---|
| Source | (genome v2.0. annotation v2.1) |
|---|
| Date performed | 2019-07-17 |
|---|
JGI Gossypium raimondii transcripts (genome v2.0, annotation v2.1) were analyzed for homology against NCBI nr proteins using blastx.
Properties
Additional information about this analysis:
| Property Name | Value |
|---|
| Analysis Type | blast_analysis |
| Analysis blast blastdb | 253 |
| Analysis blast blastfile | /mainlab/research/cottongen/data/genomes/JGI_221-D5_genome/homology_2019/nr |
| Analysis blast blastparameters | -p blastx -e 1e-9 |
| Analysis blast no parsed | 10 |
| Analysis blast query re | |
| Analysis blast query type | mRNA |
| Analysis blast query uniquename | 1 |
| Analysis blast blastfile ext | out |
| Analysis blast is concat | 0 |
| Analysis blast search keywords | 0 |
|
