Cottongen

Project Overview

Trait Descriptors

Project Overview


Name	YAM-RIL-2018
Type	QTL
Description	QTLs for fiber quality using SNP80K array
Contact	Zhang, Zheng-Sheng

Genetic Maps

This project contains 1 Maps:


Name
Yumian-1 x Acala Maxxa, RIL (2018)

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Germplasm

This project contains 6 stocks:


Name	Type
cdbpop_000094	population
cdbpop_000095	population
cdbpop_000164	population
cdbpop_000167	population
cdbpop_000172	population
cdbpop_000218	panel

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Contact

Name

Details

Zhang, Zheng-Sheng

First name	:	Zheng-Sheng
Last name	:	Zhang
Institution	:	Southwest University
Address	:	216 Tiansheng Road, Beibei, Chongqing 400716
Country	:	China
Email	:	zhangzs@swu.edu.cn
Phone	:	+8602368251264
Last update	:	13-May-2009

Traits

This project contains 5 Traits:


Name
fiber elongation
micronaire
fiber length
fiber uniformity
fiber strength

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Publications


Year	Publication
2018	Tan Z, Zhang Z, Sun X, Li Q, Sun Y, Yang P, Wang W, Liu X, Chen C, Liu D, Teng Z, Guo K, Zhang J, Liu D, Zhang Z. Genetic Map Construction and Fiber Quality QTL Mapping Using the CottonSNP80K Array in Upland Cotton. Frontiers in plant science. 2018; 9:225.

Trait Descriptors

This project contains 5 Trait Descriptors:


Group	Descriptor
cotton_trait_descriptor	FUI (%)
cotton_trait_descriptor	MIC (unit)
cotton_trait_descriptor	E1 (%)
cotton_trait_descriptor	FS (cN/tex)
cotton_trait_descriptor	UHML (mm)

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QTL

This project contains 189 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Yumian-1 x Acala Maxxa, RIL (2018).chr20	qUHML.YAM-RIL-2018_chr20.cq16	QTL	90.9	96.4	94.43
Yumian-1 x Acala Maxxa, RIL (2018).chr20	qUHML.YAM-RIL-2018_chr20.hi16	QTL	79.6	93.3	89.11
Yumian-1 x Acala Maxxa, RIL (2018).chr21	qUHML.YAM-RIL-2018_chr21.cq15	QTL	104.8	111	109.19
Yumian-1 x Acala Maxxa, RIL (2018).chr21	qUHML.YAM-RIL-2018_chr21.cq16.1	QTL	30.6	44.4	35.36
Yumian-1 x Acala Maxxa, RIL (2018).chr21	qUHML.YAM-RIL-2018_chr21.cq16.2	QTL	104.8	111	109.19
Yumian-1 x Acala Maxxa, RIL (2018).chr21	qUHML.YAM-RIL-2018_chr21.hi16	QTL	106.3	111	109.19
Yumian-1 x Acala Maxxa, RIL (2018).chr23	qUHML.YAM-RIL-2018_chr23.cq15	QTL	124.6	131.7	130.82
Yumian-1 x Acala Maxxa, RIL (2018).chr23	qUHML.YAM-RIL-2018_chr23.cq16	QTL	126.6	131.7	131.68
Yumian-1 x Acala Maxxa, RIL (2018).chr23	qUHML.YAM-RIL-2018_chr23.hi16	QTL	118.6	131.7	126.57
Yumian-1 x Acala Maxxa, RIL (2018).chr24	qUHML.YAM-RIL-2018_chr24.cq15	QTL	55.2	63.2	62.11
Yumian-1 x Acala Maxxa, RIL (2018).chr24	qUHML.YAM-RIL-2018_chr24.cq16	QTL	49.1	63	61.54
Yumian-1 x Acala Maxxa, RIL (2018).chr24	qUHML.YAM-RIL-2018_chr24.hi16	QTL	55.2	66.8	62.11
Yumian-1 x Acala Maxxa, RIL (2018).chr26	qUHML.YAM-RIL-2018_chr26.cq15	QTL	72.1	80.7	78.1
Yumian-1 x Acala Maxxa, RIL (2018).chr26	qUHML.YAM-RIL-2018_chr26.cq16	QTL	73.3	79.2	77.82

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