TX-0142 | Cottongen

Germplasm Overview

Cross References

Phenotypic Data

Snp Genotype Data

Ssr Genotype Data

Germplasm Overview


Name	TX-0142
Alias	CB 2221 [view all 7]
GRIN ID	PI 163692
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	Plants 10 to 11 feet high, about 3 years old. Bolls small and pointed, seeds with fuzzy tuft.
Origin Country	Guatemala
Origin Detail	Guatemala, Chiquimula
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 30]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2221
MW93
NSSL 3548
PI 163692
TEX 142
TX 142
NSL 3548

Image


File Name	Legend	Dataset
TX-0142_CS16-0829_5D3_5287_ST.JPG	[TX-0142] stem, College Station Plot-0829, 2016	NCGC digital imaging (College Station, 2016)
TX-0142_CS16-0829_IMG_0419_L.JPG	[TX-0142] leaf, College Station Plot-0829, 2016	NCGC digital imaging (College Station, 2016)
TX-0142_CS16-0829_MG_5676_LB.JPG	[TX-0142] leaf close up of the back surface, College Station Plot-0829, 2016	NCGC digital imaging (College Station, 2016)
TX-0142_CS16-0829_MG_5677_ST.JPG	[TX-0142] stem, College Station Plot-0829, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Phenotypic Data

Total 30 trait scores

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#	Dataset	Descriptor	Value	Environment	Replication	Plot
1	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012		V-0110
2	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012		V-0110
3	NCGC germplasm evaluation, T12	plant height (m)	1.68	MX_CLM_TCM_2012		V-0110
4	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012		V-0110
5	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012		V-0110

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	157\|173	bnl1227_157; bnl1227_173
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|160	bnl1047_150; bnl1047_160
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|238	tmb1356_201; tmb1356_238
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_000098	G/A	G
2	TAMU_SNP63K_genotype	UCD_Gh_M_000099	A/G	A
3	TAMU_SNP63K_genotype	UCD_Gh_M_000120	A/G	G
4	TAMU_SNP63K_genotype	UCD_Gh_M_000122	T/C	C
5	TAMU_SNP63K_genotype	UCD_Gh_M_000143	C/T	C
6	TAMU_SNP63K_genotype	UCD_Gh_M_000150	A/G	A
7	TAMU_SNP63K_genotype	UCD_Gh_M_000169	C/A	C
8	TAMU_SNP63K_genotype	UCD_Gh_M_000184	A/G	R
9	TAMU_SNP63K_genotype	UCD_Gh_M_000196	G/A	G
10	TAMU_SNP63K_genotype	UCD_Gh_M_000198	C/T	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_000204	G/A	A
12	TAMU_SNP63K_genotype	UCD_Gh_M_000212	A/G	A
13	TAMU_SNP63K_genotype	UCD_Gh_M_000213	G/A	G
14	TAMU_SNP63K_genotype	UCD_Gh_M_000220	A/C	C
15	TAMU_SNP63K_genotype	UCD_Gh_M_000230	C/T	T
16	TAMU_SNP63K_genotype	UCD_Gh_M_000232	G/A	G
17	TAMU_SNP63K_genotype	UCD_Gh_M_000238	A/C	A
18	TAMU_SNP63K_genotype	UCD_Gh_M_000248	T/C	T
19	TAMU_SNP63K_genotype	UCD_Gh_M_000249	A/G	A
20	TAMU_SNP63K_genotype	UCD_Gh_M_000250	G/A	G
21	TAMU_SNP63K_genotype	UCD_Gh_M_000273	A/G	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_000275	T/C	C
23	TAMU_SNP63K_genotype	UCD_Gh_M_000276	A/C	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000287	G/T	T
25	TAMU_SNP63K_genotype	UCD_Gh_M_000296	A/C	C

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0142
GRIN	PI 163692

In Collection

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163692	GRIN:
NCGC Cotton Race Collection (USA)	TX-0142