Cottongen

Project Overview


Name	GVG-RIL-2016
Type	QTL
Description	QTLs for fiber quality and oil content and seed index
Contact	Hua, Jin-Ping

Genetic Maps

This project contains 2 Maps:


Name
GX1135 x GX100-2, RIL (2016)
GX1135 x VGX100-2, RIL (2016)

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Germplasm

This project contains 722 stocks:


Name	Type
cdbprg_GG-RIL-043	accession
cdbprg_GG-RIL-044	accession
cdbprg_GG-RIL-045	accession
cdbprg_GG-RIL-046	accession
cdbprg_GG-RIL-047	accession
cdbprg_GG-RIL-048	accession
cdbprg_GG-RIL-049	accession
cdbprg_GG-RIL-050	accession
cdbprg_GG-RIL-051	accession
cdbprg_GG-RIL-052	accession
cdbprg_GG-RIL-053	accession
cdbprg_GG-RIL-054	accession
cdbprg_GG-RIL-055	accession
cdbprg_GG-RIL-056	accession
cdbprg_GG-RIL-057	accession
cdbprg_GG-RIL-058	accession
cdbprg_GG-RIL-059	accession
cdbprg_GG-RIL-060	accession
cdbprg_GG-RIL-061	accession
cdbprg_GG-RIL-062	accession
cdbprg_GG-RIL-063	accession
cdbprg_GG-RIL-064	accession
cdbprg_GG-RIL-065	accession
cdbprg_GG-RIL-066	accession
cdbprg_GG-RIL-067	accession

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Last

Contact

Name

Details

Hua, Jin-Ping

Description	:	Genomics and Heterosis
First name	:	Jin-Ping
Last name	:	Hua
Title	:	Prof.
Institution	:	China Agricultural University
Address	:	No. 2, Yuanmingyuan Western Rd, Haidian, Beijing 100193
Country	:	China
Email	:	jinping_hua@cau.edu.cn
Phone	:	+086-10-62734748
Fax	:	+086-10-62734748
Keywords	:	Cotton genetics and breeding
Last update	:	30-Apr-2010

Traits

This project contains 7 Traits:


Name
seed oil content
seed index
fiber elongation
micronaire
2.5 span length
fiber uniformity
fiber strength

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Publications


Year	Publication
2016	Shang L, Wang Y, Wang X, Liu F, Abduweli A, Cai S, Li Y, Ma L, Wang K, Hua J. Genetic Analysis and Stable QTL Detection on Fiber Quality Traits Using Two Recombinant Inbred Line Populations and Their Backcross Progeny in Upland Cotton. G3 (Bethesda, Md.). 2016 Jun 24.
2016	Shang L, Abduweli A, Wang Y, Hua J. Genetic analysis and QTL mapping of oil content and seed index using two recombinant inbred lines and two backcross populations in upland cotton. Plant Breeding. 2016 Dec 12; 135:224–231.

Trait Descriptors

This project contains 7 Trait Descriptors:


Group	Descriptor
cotton_trait_descriptor	SI (g)
cotton_trait_descriptor	MIC (unit)
cotton_trait_descriptor	FUR (%)
cotton_trait_descriptor	FEL (%)
cotton_trait_descriptor	FS (cN/tex)
cotton_trait_descriptor	SL2.5 (mm)
cotton_trait_descriptor	SOC (%)

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QTL

This project contains 133 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
GX1135 x VGX100-2, RIL (2016).chr16-2	qSI.GVG-RIL_ch16-2.hd12-bc	QTL	2.5	5.4	-
GX1135 x VGX100-2, RIL (2016).chr14-1	qSI.GVG-RIL_ch14-1.xy12-ril	QTL	56.3	71.7	-
GX1135 x VGX100-2, RIL (2016).chr14-1	qFU.GVG-RIL_ch14-1.xy12-bc	QTL	37.5	56.3	-
GX1135 x VGX100-2, RIL (2016).chr14-1	qFS.GVG-RIL_ch14-1.cz12-bc	QTL	92.6	108.4	-
GX1135 x VGX100-2, RIL (2016).chr14-1	qSOC.GVG-RIL_ch14-1.xy12-ril	QTL	92.6	108.4	-
GX1135 x VGX100-2, RIL (2016).chr21-2	qSL2.5.GVG-RIL_ch21-2.hd12-bc	QTL	21.5	35.5	-
GX1135 x VGX100-2, RIL (2016).chr23	qMIC.GVG-RIL_ch23.cz12-bc	QTL	272.4	278.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qMIC.GVG-RIL_ch23.hd12.1	QTL	257.3	272.4	-
GX1135 x VGX100-2, RIL (2016).chr19	qSL2.5.GVG-RIL_ch19.hd12	QTL	16.1	16.2	-
GX1135 x VGX100-2, RIL (2016).chr25-1	qSL2.5.GVG-RIL_ch25-1.hd12	QTL	27.8	45.9	-
GX1135 x VGX100-2, RIL (2016).chr06	qSOC.GVG-RIL_ch06.cz12-ril'.2	QTL	111.4	115.7	-
GX1135 x VGX100-2, RIL (2016).chr25-1	qMIC.GVG-RIL_ch25-1.hd12.1	QTL	67	92.8	-
GX1135 x VGX100-2, RIL (2016).chr25-1	qMIC.GVG-RIL_ch25-1.xy12	QTL	67	92.8	-
GX1135 x VGX100-2, RIL (2016).chr13	qSI.GVG-RIL_ch13.hd12-ril	QTL	32.4	32.7	-
GX1135 x VGX100-2, RIL (2016).chr23	qMIC.GVG-RIL_ch23.cz12.1	QTL	257.3	272.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qMIC.GVG-RIL_ch23.cz12.2	QTL	272.4	278.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qSI.GVG-RIL_ch23.cz12-ril.1	QTL	272.4	278.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qMIC.GVG-RIL_ch23.hd12.2	QTL	278.4	281.3	-
GX1135 x VGX100-2, RIL (2016).chr23	qSL2.5.GVG-RIL_ch23.hd12	QTL	278.4	281.3	-
GX1135 x VGX100-2, RIL (2016).chr23	qFS.GVG-RIL_ch23.cz12	QTL	281.3	281.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qSL2.5.GVG-RIL_ch23.xy12	QTL	281.3	281.4	-
GX1135 x VGX100-2, RIL (2016).chr23	qFU.GVG-RIL_ch23.hd12-bc	QTL	200.9	214.1	-
GX1135 x VGX100-2, RIL (2016).chr23	qSOC.GVG-RIL_ch23.xy12-ril	QTL	200.9	214.1	-
GX1135 x VGX100-2, RIL (2016).chr23	qSOC.GVG-RIL_ch23.xy12-bc.2	QTL	200.9	214.1	-
GX1135 x VGX100-2, RIL (2016).chr22-2	qSI.GVG-RIL_ch22-2.cz12-ril'	QTL	0	23.3	-

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