VIR-5850

Germplasm Overview

Alias

Image


File Name	Legend	Dataset
SA-3232_CS12-3030_IMG_4754_L.jpg	[SA-3232] leaf, College Station Plot# 3029, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_3647_LB.jpg	[SA-3232] leaf close up of the back surface, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_4172_F.jpg	[SA-3232] flower, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_4173_FO.jpg	[SA-3232] flower open, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_7266_B.jpg	[SA-3232] green boll, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_7267_BO.jpg	[SA-3232] boll open, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)
SA-3232_CS12-3030_MG_7268_BN.jpg	[SA-3232] boll showing nectaries, College Station Plot# 3030, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 55 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T11	trichome density on stem	moderate	MX_CLM_TCM_2011	277
2	NCGC germplasm evaluation, T11	plant height (m)	1.37	MX_CLM_TCM_2011	277
3	NCGC germplasm evaluation, T11	leaf nectaries	three	MX_CLM_TCM_2011	277
4	NCGC germplasm evaluation, T11	plot plant stand	0.75	MX_CLM_TCM_2011	277
5	NCGC germplasm evaluation, T11	productiveness	25-36 per plant	MX_CLM_TCM_2011	277

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	157\|173	bnl1227_157; bnl1227_173
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|160	bnl1047_150; bnl1047_160
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|238	tmb1356_201; tmb1356_238
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_002205	G/A	A
2	TAMU_SNP63K_genotype	UCD_Gh_M_002230	C/T	C
3	TAMU_SNP63K_genotype	UCD_Gh_M_002269	G/A	G
4	TAMU_SNP63K_genotype	UCD_Gh_M_002274	C/T	T
5	TAMU_SNP63K_genotype	UCD_Gh_M_002301	A/G	A
6	TAMU_SNP63K_genotype	UCD_Gh_M_002332	A/G	G
7	TAMU_SNP63K_genotype	UCD_Gh_M_002334	T/C	C
8	TAMU_SNP63K_genotype	UCD_Gh_M_002338	C/A	M
9	TAMU_SNP63K_genotype	UCD_Gh_M_002339	G/T	K
10	TAMU_SNP63K_genotype	UCD_Gh_M_002366	T/C	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_002380	C/A	A
12	TAMU_SNP63K_genotype	UCD_Gh_M_002390	G/A	G
13	TAMU_SNP63K_genotype	UCD_Gh_M_002400	T/C	Y
14	TAMU_SNP63K_genotype	UCD_Gh_M_002418	C/A	A
15	TAMU_SNP63K_genotype	UCD_Gh_M_002474	A/G	A
16	TAMU_SNP63K_genotype	UCD_Gh_M_002481	G/A	G
17	TAMU_SNP63K_genotype	UCD_Gh_M_002531	T/C	C
18	TAMU_SNP63K_genotype	UCD_Gh_M_002539	C/T	C
19	TAMU_SNP63K_genotype	UCD_Gh_M_002571	T/C	T
20	TAMU_SNP63K_genotype	UCD_Gh_M_002573	A/G	G
21	TAMU_SNP63K_genotype	UCD_Gh_M_002600	C/T	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_002629	T/G	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_002662	C/T	C
24	TAMU_SNP63K_genotype	UCD_Gh_M_002679	A/G	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_002694	G/T	G

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Cross References

External references for this accession


Database	Accession
GRIN	PI 694603

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