NAU3197, NAU3197 (genetic_marker) Gossypium raimondii

Marker Overview
NameNAU3197
AliasNAU3197=NAU1516
NAU1516
Genbank IDCO096834
TypeSSR
SpeciesGossypium raimondii
Source TypeEST
Repeat Motif(agg)5
PCR ConditionAnnealing temperature: 57
Primer 1NAU3197_F: TCGTGTGAATGAAGCCTAAA
Primer 2NAU3197_R: ATTTTGGCAACAGAATTGGT
Restriction EnzymeNotI; EcoRV
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCO096834
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A05chromosomeA05:5197292..5197594 .Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1CottonGen marker alignment to genome using primer sequences
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch05_At.05N/A46.05NAU3197bView
2Emian-22 x 3-79, BC1 (2011)AD_ch16_Dt.07N/A112.39NAU3197aView
3CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch05_At.05N/A32.4NAU3197View