USDA_SNP0284, USDA_SNP0284 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0284
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018211.1chromosomeCM018211.1:1742983..1743045 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:127622038..127622100 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold26.1supercontigscaffold26.1:1547723..1547785 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:1715887..1715949 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:1450849..1450911 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:1757395..1757457 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:1081378..1081440 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:1864769..1864831 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:1821546..1821608 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:1785671..1785733 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017619.1chromosomeCM017619.1:1908695..1908757 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:1948277..1948339 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:1786503..1786565 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:1849124..1849186 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:1724267..1724329 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr10chromosomeChr10:1715243..1715305 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_10chromosomeB_10:97061707..97061769 -Gossypium anomalum (B1) genome NSF_v1n/a
Sequence
>USDA_SNP0284 ID=USDA_SNP0284; Name=USDA_SNP0284; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGCAATCATTTTT[A/G]CTCTAAAAAAGGACATTCATTTACCGACA
ATCAGCGTATAAGAGCA