TAMU_GH_TBb120B07f454, TAMU_GH_TBb120B07f454 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb120B07f454
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i35031Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
CM018206.1chromosomeCM018206.1:89804886..89804986 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:84627540..84627640 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1
At_chr9chromosomeAt_chr9:66592940..66593040 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1
A05chromosomeA05:78742923..78743023 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1
Ghir_A05chromosomeGhir_A05:96091293..96091393 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1
A05chromosomeA05:97581835..97581935 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1
A05chromosomeA05:96016665..96016765 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1
A05chromosomeA05:94093980..94094080 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1
Gbar_A05chromosomeGbar_A05:89777451..89777551 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1
A05chromosomeA05:94852805..94852905 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1
CM017614.1chromosomeCM017614.1:91657302..91657402 +Gossypium tomentosum (AD3) genome HGS_v1.1
CM017640.1chromosomeCM017640.1:100066718..100066818 +Gossypium mustelinum (AD4) genome JGI_v1.1
CM017692.1chromosomeCM017692.1:92602881..92602981 +Gossypium darwinii (AD5) genome HGS_v1.1
A05chromosomeA05:97599025..97599125 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1
Chr04chromosomeChr04:14030312..14030412 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1
Chr04chromosomeChr04:13971653..13971753 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch05_At.05N/A56.23SNPi35031GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A50.8i35031GhView
Sequence
>TAMU_GH_TBb120B07f454 ID=TAMU_GH_TBb120B07f454; Name=TAMU_GH_TBb120B07f454; organism=Gossypium sp.; type=genetic_marker; length=105bp
GATCCAACAGTCTCCCACTTGGCTTAGCGAAGTGGATAAGTCATATTTCG
[C/T]ATTTTTATGCTCTTTGTATGTTTTTCAAAGCTCCTAGCTAGTAGA
GTCTT