NAU_TM75133, NAU_TM75133 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM75133
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM75133
TypeSNP
SNP AllelesA/T
5' Flanking SequenceAGAATCCAAAACTACCGAAAATGAACATAAGTTTTGATATATAAAAGTGGTAATTTGACA
3' Flanking SequenceGCTCCAAGTGGAATGACAAAATATGGCAAATAATGCACACCCCCTATAGACCAACAGTTT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018224.1chromosomeCM018224.1:63820173..63820293 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:2743718..2743838 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold347.1supercontigscaffold347.1:995004..995124 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:61246736..61246856 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:64909699..64909819 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:64155797..64155917 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:63156482..63156602 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:61477947..61478067 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:62490874..62490994 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:63299765..63299885 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:63457318..63457438 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:64609471..64609590 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:64166724..64166844 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:66872930..66873050 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:59315471..59315591 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
chr11chromosomechr11:50195128..50195248 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_11chromosomeChr_11:41705773..41705893 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr11chromosomeChr11:45559150..45559271 +Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch20_Dt.10N/A13.6TM75133View
Sequence
>NAU_TM75133 ID=NAU_TM75133; Name=NAU_TM75133; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGAATCCAAAACTACCGAAAATGAACATAAGTTTTGATATATAAAAGTGG
TAATTTGACA[A/T]GCTCCAAGTGGAATGACAAAATATGGCAAATAATG
CACACCCCCTATAGACCAACAGTTT