NAU_TM74687, NAU_TM74687 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM74687
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM74687
TypeSNP
SNP AllelesC/A
5' Flanking SequenceACAATTAGGTGACCAAAAAAGAAAAAAAATCATGGTTGGGTGCCTCTCCTATAGTTTACC
3' Flanking SequenceTATAATAAATATATTTTGAGTGACTACAATTATATCCAATCAAAGGTCAATTAGGCATCA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018224.1chromosomeCM018224.1:52632965..52633085 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:12146138..12146258 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr11chromosomeDt_chr11:57640932..57641052 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:52422914..52423034 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:54936593..54936713 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:54965760..54965880 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:53632733..53632853 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:51926702..51926822 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:52598423..52598543 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:53608243..53608363 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:52549537..52549657 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:54706265..54706385 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:53827279..53827399 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:54993540..54993660 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:50197657..50197777 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
chr11chromosomechr11:42886912..42887032 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr11chromosomeChr11:36958820..36958940 +Gossypium aridum (D4) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch20_Dt.10N/A75TM74687View
2LMY28 x XLZ24, RIL (2018)AD_ch20_Dt.10N/A45.06TM74687View
Sequence
>NAU_TM74687 ID=NAU_TM74687; Name=NAU_TM74687; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACAATTAGGTGACCAAAAAAGAAAAAAAATCATGGTTGGGTGCCTCTCCT
ATAGTTTACC[A/C]TATAATAAATATATTTTGAGTGACTACAATTATAT
CCAATCAAAGGTCAATTAGGCATCA