USDA_SNP0182, USDA_SNP0182 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0182
dbSNP IDN/A
TypeSNP
SNP AllelesC/T
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:22625902..22625964 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:23273018..23273080 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr9chromosomeAt_chr9:38042447..38042509 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:21029336..21029398 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:23166228..23166290 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:23220892..23220954 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:23365254..23365316 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:22300558..22300620 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:22983760..22983822 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:22804423..22804485 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:23139829..23139891 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:22543948..22544010 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:23578059..23578121 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:24807553..24807615 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:23194874..23194936 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_05chromosomeB_05:63423217..63423279 -Gossypium anomalum (B1) genome NSF_v1n/a
F05chromosomeF05:19851709..19851771 +Gossypium longicalyx (F1) genome NSF_v1n/a
Sequence
>USDA_SNP0182 ID=USDA_SNP0182; Name=USDA_SNP0182; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGTTTCGCAATATGATTTCATTTT[C/T]GTCGTTTTAATTAACCTT
AAAAATAATTTAATGTT