USDA_SNP0126, USDA_SNP0126 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0126
dbSNP IDN/A
TypeSNP
SNP AllelesC/T
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018211.1chromosomeCM018211.1:2709066..2709128 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
scaffold26.1supercontigscaffold26.1:558130..558192 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:2655508..2655570 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:2486483..2486545 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:2715859..2715921 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:2081483..2081545 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:2898335..2898397 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:2851194..2851256 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:2787495..2787557 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017619.1chromosomeCM017619.1:2919274..2919336 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:2998686..2998748 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017645.1chromosomeCM017645.1:2968526..2968588 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:2839618..2839680 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:2897670..2897732 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:2699887..2699949 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr11chromosomeChr11:2652308..2652370 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>USDA_SNP0126 ID=USDA_SNP0126; Name=USDA_SNP0126; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGGTGTTTGTTTGAATGTGAAAAGGTTGGCTTGAAATGAAAATT[C/
T]AGAAAACATGTCATA