USDA_SNP0108, USDA_SNP0108 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0108
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018222.1chromosomeCM018222.1:61168046..61168108 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D10_08chromosomeD10_08:22208987..22209048 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr12chromosomeDt_chr12:10528055..10528117 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D08chromosomeD08:61712765..61712827 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D08chromosomeGhir_D08:64116506..64116568 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D08chromosomeD08:64538522..64538584 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D08chromosomeD08:63951692..63951754 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D08chromosomeD08:61246993..61247055 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D08chromosomeGbar_D08:61283044..61283106 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D08chromosomeD08:63097764..63097826 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017630.1chromosomeCM017630.1:62870838..62870900 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:18422835..18422897 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017656.1chromosomeCM017656.1:65022489..65022551 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017708.1chromosomeCM017708.1:61593637..61593699 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D08chromosomeD08:64739057..64739119 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr_09chromosomeChr_09:22701742..22701803 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Sequence
>USDA_SNP0108 ID=USDA_SNP0108; Name=USDA_SNP0108; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGGGACACCGTGGTTTTTTAATAATCACTTACTT[A/G]TACTCCAA
TCAATTTCTGAGGGTGA