USDA_SNP0101, USDA_SNP0101 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0101
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018222.1chromosomeCM018222.1:65196352..65196388 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:128712570..128712606 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
CM016621.1chromosomeCM016621.1:806573..806609 +Gossypium australe (G2) genome CRI_v1.1n/a
D08chromosomeD08:65276914..65276950 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A08chromosomeA08:102952621..102952657 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:121961088..121961124 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D08chromosomeD08:68423574..68423610 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:124417954..124417990 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:120544557..120544593 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
D08chromosomeD08:67051678..67051714 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:118627003..118627039 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:128464852..128464888 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
D08chromosomeD08:68749262..68749298 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A08chromosomeA08:126793781..126793817 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:131318440..131318476 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Sequence
>USDA_SNP0101 ID=USDA_SNP0101; Name=USDA_SNP0101; organism=Gossypium hirsutum; type=genetic_marker; length=41bp
TGCAGGAGGCGGCGGTGGCTTCA[A/G]TGGCTGCGGAGCC