USDA_SNP0029, USDA_SNP0029 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0029
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:4477722..4477784 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
scaffold4755.1supercontigscaffold4755.1:37648..37710 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:3926826..3926888 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:4520423..4520485 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:4387369..4387431 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:4496652..4496713 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:4903005..4903067 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Scaffold3009supercontigScaffold3009:11526..11588 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Scaffold1819supercontigScaffold1819:24271..24333 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:4654411..4654473 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:4515210..4515272 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:4563284..4563346 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:4446565..4446627 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:4655466..4655528 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:4793667..4793728 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Sequence
>USDA_SNP0029 ID=USDA_SNP0029; Name=USDA_SNP0029; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGAGACTGATAGGACGAAAATTAGCCATCTCACTAGGATTTTT[A/G
]ATCTTAGGAATTAAGA