TAMU_GH_TBr165D09r500, TAMU_GH_TBr165D09r500 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBr165D09r500
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i47873Gh
TypeSNP
SNP AllelesT/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018207.1chromosomeCM018207.1:923621..923721 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM016619.1chromosomeCM016619.1:145049550..145049651 -Gossypium australe (G2) genome CRI_v1.1n/a
scaffold2312.1supercontigscaffold2312.1:159667..159767 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A06chromosomeA06:692428..692528 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A06chromosomeGhir_A06:911389..911489 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A06chromosomeA06:875292..875392 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:827925..828025 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:900678..900778 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A06chromosomeGbar_A06:798371..798471 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A06chromosomeA06:886483..886583 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017615.1chromosomeCM017615.1:933159..933259 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:937189..937289 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017693.1chromosomeCM017693.1:881542..881642 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A06chromosomeA06:918071..918171 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
B_06chromosomeB_06:96767553..96767652 -Gossypium anomalum (B1) genome NSF_v1n/a
E06chromosomeE06:117332759..117332860 -Gossypium stocksii (E1) genome NSF_v1n/a
F06chromosomeF06:433177..433278 +Gossypium longicalyx (F1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch06_At.06N/A0i47873GhView
2DS-28 x SBYF-425, RIL (2022)AD_ch06_At.06N/A0i47873GhView
Sequence
>TAMU_GH_TBr165D09r500 ID=TAMU_GH_TBr165D09r500; Name=TAMU_GH_TBr165D09r500; organism=Gossypium sp.; type=genetic_marker; length=101bp
CTTTTTAGAGTATATAAGCTTATGATGTTTGCATTCACTCATTTCTTGCA
KGGTAATTTTTTTAAGCATTGTGGGTAAAGTTGATTWGTAGAAACTGATT
A