TAMU_GH_TBh114P22f407, TAMU_GH_TBh114P22f407 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh114P22f407
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i46867Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr08chromosomeChr08:39384939..39384939 .Gossypium raimondii (D5) genome JGI_v2_a2.1n/a
CM018226.1chromosomeCM018226.1:41761256..41761356 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Dt_chr8chromosomeDt_chr8:38180998..38181098 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D12chromosomeD12:41115767..41115867 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D12chromosomeGhir_D12:44165872..44165972 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D12chromosomeD12:43319866..43319966 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D12chromosomeD12:44138081..44138181 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D12chromosomeD12:41993232..41993332 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D12chromosomeGbar_D12:41008161..41008261 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D12chromosomeD12:42287112..42287212 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017634.1chromosomeCM017634.1:42171825..42171925 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017660.1chromosomeCM017660.1:44533319..44533419 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017712.1chromosomeCM017712.1:42859928..42860028 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D12chromosomeD12:44108018..44108118 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:41361089..41361189 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch26_Dt.12N/A66.63i46867GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch26_Dt.12N/A68.6i46867GhView
Sequence
>TAMU_GH_TBh114P22f407 ID=TAMU_GH_TBh114P22f407; Name=TAMU_GH_TBh114P22f407; organism=Gossypium sp.; type=genetic_marker; length=105bp
CTGAAAACCCAAATCATGAACATTGGTAGACTTTAAGAAATTATCACAAA
[A/G]CGGAAACCTCATTCCTCTAATCTGTCCACCTCTCTTCTCATTAGT
CGAAA