TAMU_GH_TBh110O14f308, TAMU_GH_TBh110O14f308 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh110O14f308
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i46424Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:26309699..26309799 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:26849735..26849834 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr9chromosomeAt_chr9:57794753..57794853 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:24324483..24324583 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:26241706..26241806 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:26261089..26261189 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:27151700..27151800 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:26215549..26215649 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:25075545..25075645 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:26660226..26660326 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:26685488..26685588 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:26975085..26975185 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:26345663..26345763 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:27601218..27601318 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:28020428..28020528 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:27226373..27226472 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch05_At.05N/A98.43SNPi46424GhView
23-79 x TM-1, F2 (2015 SNP)AD_ch05_At.05N/A111.6i46424GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A90.7i46424GhView
4DS-28 x SBYF-425, RIL (2022)AD_ch05_At.05N/A14.07i46424GhView
Sequence
>TAMU_GH_TBh110O14f308 ID=TAMU_GH_TBh110O14f308; Name=TAMU_GH_TBh110O14f308; organism=Gossypium sp.; type=genetic_marker; length=105bp
AAAGATAATTTAGCCTCTTAGGTTTTGAAACACACGAGGCTTAGGTTCGA
[C/T]ACATAGTTATATGTATCGACACTTACAACCAAGGGGTCTGATACC
CTTGA