TAMU_GH_TBh059P03r167, TAMU_GH_TBh059P03r167 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh059P03r167
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i41258Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:90137409..90137509 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:85057929..85058029 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr9chromosomeAt_chr9:66929037..66929137 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:79079375..79079475 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:96427898..96427998 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:97911013..97911113 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:96353552..96353652 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:94430882..94430982 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:90109944..90110044 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:95182028..95182128 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:92006371..92006471 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:100489334..100489434 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:92939878..92939978 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:97935927..97936027 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:13611929..13612029 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr04chromosomeChr04:13540988..13541088 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch05_At.05N/A55.24SNPi41258GhView
23-79 x TM-1, F2 (2015 SNP)AD_ch05_At.05N/A62.06i41258GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A50.8i41258GhView
Sequence
>TAMU_GH_TBh059P03r167 ID=TAMU_GH_TBh059P03r167; Name=TAMU_GH_TBh059P03r167; organism=Gossypium sp.; type=genetic_marker; length=105bp
TCAAATTTATCGTTGGTGGAACATACAATAGATCAAAGTGTCGAGAAATG
[A/G]TTGGAAGTTCTTTTTTGGGGGTGATACGGATCATCCCAACTCTAA
AAAAT