TAMU_GH_TBh044P23r369, TAMU_GH_TBh044P23r369 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh044P23r369
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i39754Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:33996900..33997000 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018206.1chromosomeCM018206.1:33980951..33981051 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:35004037..35004137 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr9chromosomeDt_chr9:38870783..38870883 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:31842378..31842478 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:33941905..33942005 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:33706907..33707007 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:34873883..34873983 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:33954344..33954444 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:32827251..32827351 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
scaffold50_obj_A05supercontigscaffold50_obj_A05:5009..5109 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
scaffold33830_objsupercontigscaffold33830_obj:1056..1156 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:33999640..33999740 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017692.1chromosomeCM017692.1:34238762..34238862 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:35317747..35317847 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:36323107..36323207 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:36049264..36049364 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch05_At.05N/A73.97SNPi39754GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A66.6i39754GhView
Sequence
>TAMU_GH_TBh044P23r369 ID=TAMU_GH_TBh044P23r369; Name=TAMU_GH_TBh044P23r369; organism=Gossypium sp.; type=genetic_marker; length=105bp
GATGATGAAGAGAGGTATGTTAACCTCTAAAAATGAGAAAGGGGAAATAA
[A/G]GAGCTATGGTGAGTTCCATGAGAAAGAATGATACGAAACTCAAGA
TTGTG