TAMU_GH_TBh033F20f424, TAMU_GH_TBh033F20f424 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh033F20f424
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i38420Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:169021..169121 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:256234..256334 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold1755.1supercontigscaffold1755.1:87477..87577 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:240255..240355 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:286178..286278 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:237359..237459 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:289486..289586 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:280511..280611 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:143561..143661 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:237146..237246 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:263119..263219 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:222224..222324 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:271968..272068 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:279476..279576 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:191710..191810 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:189103..189203 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
13-79 x TM-1, F2 (2015 SNP)AD_ch01_At.01N/A144.31i38420GhView
Sequence
>TAMU_GH_TBh033F20f424 ID=TAMU_GH_TBh033F20f424; Name=TAMU_GH_TBh033F20f424; organism=Gossypium sp.; type=genetic_marker; length=105bp
TTAGACCGAGTAAGGGGTGTTAAAAAAATGGTTACTATGTTTTAAATAAG
[C/T]TTCCGGTTAATTAAACATAACATTTATCATCTTAGTTAATAACTA
TTTTC