TAMU_GH_TBh028E03f370, TAMU_GH_TBh028E03f370 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh028E03f370
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i37823Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr08chromosomeChr08:4941958..4941958 .Gossypium raimondii (D5) genome JGI_v2_a2.1n/a
CM018213.1chromosomeCM018213.1:5647616..5647716 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_12chromosomeD5_12:52421173..52421272 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Chr12_CRI-A2_v1.0.a1chromosomeChr12_CRI-A2_v1.0.a1:99977738..99977838 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_12chromosomeD10_12:4706497..4706597 +Gossypium turneri (D10) genome NSF_v1_a2n/a
At_chr8chromosomeAt_chr8:46125281..46125381 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A12chromosomeA12:5763261..5763361 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A12chromosomeGhir_A12:5788267..5788367 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A12chromosomeA12:5569480..5569580 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A12chromosomeA12:5844699..5844799 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A12chromosomeA12:5814191..5814291 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A12chromosomeGbar_A12:5780846..5780946 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A12chromosomeA12:5561789..5561889 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017621.1chromosomeCM017621.1:5506588..5506688 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017647.1chromosomeCM017647.1:5856671..5856771 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017699.1chromosomeCM017699.1:5438609..5438709 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A12chromosomeA12:5858724..5858824 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr12chromosomeChr12:6555020..6555120 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr12chromosomeChr12:6551630..6551730 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr12chromosomeChr12:4990052..4990152 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
chr08chromosomechr08:4888028..4888128 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_08chromosomeChr_08:4884781..4884881 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr08chromosomeChr08:4555259..4555359 +Gossypium aridum (D4) genome ISU_v1n/a
Chr08chromosomeChr08:4389025..4389125 +Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch12_At.12N/A18.57i37823GhView
Sequence
>TAMU_GH_TBh028E03f370 ID=TAMU_GH_TBh028E03f370; Name=TAMU_GH_TBh028E03f370; organism=Gossypium sp.; type=genetic_marker; length=105bp
AGAGTGTCACGTTATTATGGCTATTTTAGTACTAGCCCATTCAGCCAAGC
[C/T]GAGTAACGAGGTGCTTGTTTTGTCTTTTTGATTATTCATATTTAA
TCTCT