TAMU_GH_TBh024O02r503, TAMU_GH_TBh024O02r503 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBh024O02r503
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i37467Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:10620790..10620790 .Gossypium raimondii (D5) genome JGI_v2_a2.1n/a
CM018220.1chromosomeCM018220.1:10713900..10714000 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:10736490..10736590 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_06chromosomeD10_06:49424319..49424419 +Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016619.1chromosomeCM016619.1:126319567..126319666 +Gossypium australe (G2) genome CRI_v1.1n/a
Dt_chr10chromosomeDt_chr10:22148185..22148285 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:10852369..10852469 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:11448190..11448290 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:11090284..11090384 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:11433098..11433198 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:10954541..10954641 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:10865454..10865554 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:10675032..10675132 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:11389725..11389825 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:11084798..11084898 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:10913292..10913392 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:11573171..11573271 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:10522696..10522796 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_06chromosomeB_06:82333364..82333463 +Gossypium anomalum (B1) genome NSF_v1n/a
Chr10chromosomeChr10:11090076..11090176 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr10chromosomechr10:9440933..9441033 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr10chromosomeChr10:11371167..11371267 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr10chromosomeChr10:7850716..7850816 -Gossypium aridum (D4) genome ISU_v1n/a
Chr10chromosomeChr10:6813554..6813654 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr10chromosomeChr10:8248546..8248646 -Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch25_Dt.06N/A61.35SNPi37467GhView
23-79 x TM-1, F2 (2015 SNP)AD_ch25_Dt.06N/A83.46i37467GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch25_Dt.06N/A67.5i37467GhView
Sequence
>TAMU_GH_TBh024O02r503 ID=TAMU_GH_TBh024O02r503; Name=TAMU_GH_TBh024O02r503; organism=Gossypium sp.; type=genetic_marker; length=105bp
GAAGTTCAAATAAGAACGAAAAGAATAGAAGTTAATTGTTTTCCGGCTAG
[A/G]GAACTCCAATAGCCTACATACAGAACCTTAAATGGAAGGTTGATG
AGAAA