TAMU_GH_TBb117I22r651, TAMU_GH_TBb117I22r651 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb117I22r651
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i34756Gh
TypeSNP
SNP AllelesA/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018209.1chromosomeCM018209.1:98276757..98276857 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:106913764..106913864 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold306.1supercontigscaffold306.1:897676..897776 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:83809176..83809276 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:102012276..102012376 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:105206584..105206684 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:104820140..104820240 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:100872808..100872908 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:98973405..98973505 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:100173519..100173619 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:98425889..98425989 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:107973429..107973529 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017695.1chromosomeCM017695.1:99179213..99179313 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A08chromosomeA08:106646399..106646499 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:110238018..110238118 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr08chromosomeChr08:110992755..110992855 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch08_At.08N/A79.07i34756GhView
2Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch08_At.08N/A77.9i34756GhView
Sequence
>TAMU_GH_TBb117I22r651 ID=TAMU_GH_TBb117I22r651; Name=TAMU_GH_TBb117I22r651; organism=Gossypium sp.; type=genetic_marker; length=105bp
CTTCCTGTTGGGGACAGGAATAGCAGTCTATAAAATTAGCATCCATCCCT
[A/C]CGATTATGATTGTCGAAGTAGCTACACAAGCAAAACAAACAATCA
GACTT