TAMU_GH_TBb104E19r66, TAMU_GH_TBb104E19r66 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb104E19r66
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i33405Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A05chromosomeA05:86107141..86107241 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018206.1chromosomeCM018206.1:89738052..89738152 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
At_chr9chromosomeAt_chr9:66524936..66525036 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:78676187..78676287 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:96024671..96024771 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:97515072..97515172 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:95950068..95950168 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:94027315..94027415 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:89710617..89710717 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:94785971..94786071 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:91597074..91597174 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:99996304..99996404 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:92536043..92536143 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:97532363..97532463 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:14104089..14104189 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch05_At.05N/A56.18SNPi33405GhView
23-79 x TM-1, F2 (2015 SNP)AD_ch05_At.05N/A62.06i33405GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A50.8i33405GhView
Sequence
>TAMU_GH_TBb104E19r66 ID=TAMU_GH_TBb104E19r66; Name=TAMU_GH_TBb104E19r66; organism=Gossypium sp.; type=genetic_marker; length=105bp
ATCAGTTGCGAGTTAGAGATGTAGATGTACTGAAAACAGTATTCAGAAAG
[C/T]ATTATAGACATTACAAATTTTTAGTTTTGCCTTTCGGATTAACTA
ATGTG