TAMU_GH_TBb093L18f631, TAMU_GH_TBb093L18f631 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb093L18f631
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i32268Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_488supercontigscaffold_488:5363..5462 +
A03chromosomeA03:7825295..7825395 +
A01chromosomeA01:4077178..4077278 +
scaffold_488supercontigscaffold_488:32231..32331 -
CM018204.1chromosomeCM018204.1:7736830..7736930 +
CM018202.1chromosomeCM018202.1:3104243..3104343 +
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:104951296..104951396 +
tig00000862_CRI-A2_v1.0.a1chromosometig00000862_CRI-A2_v1.0.a1:13394..13494 -
scaffold732.1supercontigscaffold732.1:276518..276618 +
At_chr5chromosomeAt_chr5:6731292..6731392 -
A01chromosomeA01:2921521..2921621 +
scaffold515_A03supercontigscaffold515_A03:209691..209791 -
Ghir_A03chromosomeGhir_A03:8668915..8669015 +
Ghir_A01chromosomeGhir_A01:3378815..3378915 +
A03chromosomeA03:8193224..8193324 +
A01chromosomeA01:3230204..3230304 +
A03chromosomeA03:8640080..8640180 +
A01chromosomeA01:3374141..3374241 +
A03chromosomeA03:8058016..8058116 +
A01chromosomeA01:3326324..3326424 +
Gbar_A03chromosomeGbar_A03:7669915..7670015 +
Gbar_A01chromosomeGbar_A01:3093622..3093722 +
A03chromosomeA03:7860956..7861056 +
A01chromosomeA01:3091752..3091852 +
CM017612.1chromosomeCM017612.1:8199177..8199277 +
CM017610.1chromosomeCM017610.1:3655811..3655911 +
CM017638.1chromosomeCM017638.1:8611701..8611801 +
CM017636.1chromosomeCM017636.1:3158925..3159025 +
CM017690.1chromosomeCM017690.1:8069465..8069565 +
CM017688.1chromosomeCM017688.1:3122693..3122793 +
A03chromosomeA03:8733512..8733612 +
A01chromosomeA01:3371813..3371913 +
Chr01chromosomeChr01:3228121..3228221 +
Chr01chromosomeChr01:3146046..3146146 +
Chr01chromosomeChr01:110371996..110372096 -
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch01_At.01N/A114.17SNPi32268GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch01_At.01N/A27.07i32268GhView
33-79 x TM-1, F2 (2015 SNP)AD_ch01_At.01N/A127.17i32268GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch01_At.01N/A105.1i32268GhView
Sequence
>TAMU_GH_TBb093L18f631 ID=TAMU_GH_TBb093L18f631; Name=TAMU_GH_TBb093L18f631; organism=Gossypium sp.; type=genetic_marker; length=105bp
TGAGTAATATGACCAGATGCGTATGCAGAATATCAATTTTCTTTTTCGAG
[C/T]TGATCTCATTTAATGCTTGGGTGAACATTGTTCATCATTCGTCGA
GGTTG