TAMU_GH_TBb063A21r398, TAMU_GH_TBb063A21r398 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb063A21r398
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i29254Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A07chromosomeA07:15305429..15305529 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018208.1chromosomeCM018208.1:15202809..15202909 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:13857987..13858087 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold756.1supercontigscaffold756.1:95303..95403 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:14497621..14497721 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:15575949..15576049 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:14897060..14897160 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:15569013..15569113 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:15542854..15542954 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:15188959..15189059 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:15256462..15256562 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:15143200..15143300 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017694.1chromosomeCM017694.1:15421488..15421588 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:15726949..15727049 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:16317328..16317428 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:16535561..16535661 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
13-79 x TM-1, F2 (2015 SNP)AD_ch07_At.07N/A89.84i29254GhView
Sequence
>TAMU_GH_TBb063A21r398 ID=TAMU_GH_TBb063A21r398; Name=TAMU_GH_TBb063A21r398; organism=Gossypium sp.; type=genetic_marker; length=105bp
ATTGCTTACACTATTTCTTTTATGAGAAACTAGACTCAATAATCTTTAAT
[C/T]CCATGTTTTGTTCATCTTCTAATTAGATTCCTCCAATTTATGGTG
ATTTT