TAMU_GH_TBb059E10r30, TAMU_GH_TBb059E10r30 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb059E10r30
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i28846Gh
TypeSNP
SNP AllelesT/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A03chromosomeA03:81721613..81721692 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018204.1chromosomeCM018204.1:83267960..83268039 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr03_CRI-A2_v1.0.a1chromosomeChr03_CRI-A2_v1.0.a1:107567802..107567881 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold615.1supercontigscaffold615.1:833190..833269 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A03chromosomeA03:75204922..75205001 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A03chromosomeGhir_A03:89104468..89104547 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A03chromosomeA03:88351866..88351945 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:86131143..86131222 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:81702283..81702362 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A03chromosomeGbar_A03:82617351..82617430 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A03chromosomeA03:84735883..84735962 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017612.1chromosomeCM017612.1:84263749..84263828 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:90550649..90550728 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017690.1chromosomeCM017690.1:84673101..84673180 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A03chromosomeA03:89598030..89598109 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:27491695..27491774 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1DS-28 x SBYF-425, RIL (2022)AD_ch03_At.03N/A95.19i28846GhView
Sequence
>TAMU_GH_TBb059E10r30 ID=TAMU_GH_TBb059E10r30; Name=TAMU_GH_TBb059E10r30; organism=Gossypium sp.; type=genetic_marker; length=84bp
TTAAGAGTACCATTAATTTTTCCCCTTTT[G/T]GGGTACAAATTCATGA
CATCCCAATAGGATTATTTTATGAAAATTTAGCA