TAMU_GH_TBb046F18f82, TAMU_GH_TBb046F18f82 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb046F18f82
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i27582Gh
TypeSNP
SNP AllelesA/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A03chromosomeA03:101194184..101194284 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018204.1chromosomeCM018204.1:99183834..99183934 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
At_chr5chromosomeAt_chr5:47876694..47876794 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A03chromosomeA03:93525481..93525581 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A03chromosomeGhir_A03:105859564..105859664 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A03chromosomeA03:104784909..104785009 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:102936401..102936501 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:98200473..98200573 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A03chromosomeGbar_A03:98344934..98345034 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A03chromosomeA03:100710410..100710510 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017612.1chromosomeCM017612.1:99965260..99965360 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:107112549..107112649 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017690.1chromosomeCM017690.1:101108907..101109007 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A03chromosomeA03:106540790..106540890 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:7147128..7147228 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch03_At.03N/A21.48i27582GhView
23-79 x TM-1, F2 (2015 SNP)AD_ch03_At.03N/A48.5i27582GhView
Sequence
>TAMU_GH_TBb046F18f82 ID=TAMU_GH_TBb046F18f82; Name=TAMU_GH_TBb046F18f82; organism=Gossypium sp.; type=genetic_marker; length=105bp
GTATTTGCTATTAAGTGGTATATCATGAATGTGTCAGTTGAATGCGAAGT
[A/C]ACAGTGTCTAAACCGAAATTATATATTAGGTAGTGTTGGAGGTCA
ACAAA