TAMU_GH_TBb032O08r469, TAMU_GH_TBb032O08r469 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb032O08r469
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i26290Gh
TypeSNP
SNP AllelesT/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A05chromosomeA05:94450404..94450504 +
CM018206.1chromosomeCM018206.1:96855721..96855821 +
CM018218.1chromosomeCM018218.1:5048965..5049065 -
KI_06chromosomeKI_06:46558601..46558697 -
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:92347441..92347541 +
D10_04chromosomeD10_04:4889820..4889920 -
CM016617.1chromosomeCM016617.1:8011504..8011604 -
At_chr9chromosomeAt_chr9:59850022..59850122 +
A05chromosomeA05:86191617..86191717 +
Ghir_A05chromosomeGhir_A05:103293057..103293157 +
A05chromosomeA05:104903081..104903181 +
A05chromosomeA05:103395439..103395539 +
A05chromosomeA05:101332558..101332658 +
Gbar_A05chromosomeGbar_A05:96873033..96873133 +
Gbar_D04chromosomeGbar_D04:5039313..5039413 -
A05chromosomeA05:101825336..101825436 +
D04chromosomeD04:5016345..5016445 -
CM017614.1chromosomeCM017614.1:99130024..99130124 +
CM017640.1chromosomeCM017640.1:107534434..107534534 +
CM017652.1chromosomeCM017652.1:5307260..5307360 -
CM017692.1chromosomeCM017692.1:99747760..99747860 +
CM017704.1chromosomeCM017704.1:5314412..5314512 -
A05chromosomeA05:105089187..105089287 +
Chr04chromosomeChr04:6404271..6404371 -
Chr04chromosomeChr04:6227561..6227661 -
B_02chromosomeB_02:78402554..78402654 +
Chr12chromosomeChr12:5337710..5337810 -
chr12chromosomechr12:4859194..4859294 -
Chr_12chromosomeChr_12:3688358..3688458 -
Chr12chromosomeChr12:5054593..5054693 -
Chr12chromosomeChr12:5189212..5189312 -
Chr12chromosomeChr12:3478979..3479079 -
E04chromosomeE04:7846671..7846771 -
F04chromosomeF04:5241486..5241586 -
Chr04chromosomeChr04:7503680..7503780 -
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch05_At.05N/A12.65i26290GhView
20-153 x sGK9708, RIL (2017)AD_ch05_At.05N/A80.3i26290GhView
3HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch05_At.05N/A12.65i26290GhView
43-79 x TM-1, F2 (2015 SNP)AD_ch05_At.05N/A29.49i26290GhView
5Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch05_At.05N/A30.4i26290GhView
Sequence
>TAMU_GH_TBb032O08r469 ID=TAMU_GH_TBb032O08r469; Name=TAMU_GH_TBb032O08r469; organism=Gossypium sp.; type=genetic_marker; length=105bp
AAAAAAACAAAAGAATCACTTATGATCCAAGTAAGAGACAGATAAAGTAA
[G/T]ATAAAAAGAGCAAGAAAGAGAGAGCATTTACCTCGATCTTCTTCC
TTGAG