TAMU_GH_TBb032O06f423, TAMU_GH_TBb032O06f423 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb032O06f423
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i56237Gb
TypeSNP
SNP AllelesA/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:50605952..50605952 .Gossypium raimondii (D5) genome JGI_v2_a2.1n/a
D06chromosomeD06:56148121..56148221 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:51011394..51011494 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Dt_chr10chromosomeDt_chr10:3234850..3234950 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:52410708..52410808 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:54670138..54670238 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:53864795..53864895 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:53883133..53883233 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:51172342..51172442 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:51186728..51186828 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:51395832..51395932 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:51803723..51803823 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:54660606..54660706 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:51710950..51711050 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:54595255..54595355 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:51307179..51307278 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr10chromosomeChr10:52890162..52890262 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
13-79 x TM-1, F2 (2015 SNP)AD_ch25_Dt.06N/A47.97i56237GbView
2DS-28 x SBYF-425, RIL (2022)AD_ch19_Dt.05N/A58.87i56237GbView
Sequence
>TAMU_GH_TBb032O06f423 ID=TAMU_GH_TBb032O06f423; Name=TAMU_GH_TBb032O06f423; organism=Gossypium sp.; type=genetic_marker; length=105bp
GGAGTGACCAAAAGGGCAAATAGCCCAATTTTTGCAATCTAGCTTTCAAA
[A/C]TTTCAGTCATTCATGTCTTCCCCTCCCATTTTCACGTCATTCAAA
AATAA