TAMU_GH_TBb029A18f211, TAMU_GH_TBb029A18f211 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb029A18f211
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i25863Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:2085616..2085716 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018217.1chromosomeCM018217.1:1876843..1876943 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D10_02chromosomeD10_02:1768464..1768566 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr5chromosomeDt_chr5:15736179..15736279 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D03chromosomeD03:1962985..1963085 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D03chromosomeGhir_D03:2019818..2019918 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D03chromosomeD03:1971408..1971508 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D08chromosomeD08:34204354..34204454 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D03chromosomeD03:2028355..2028455 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D03chromosomeD03:2026904..2027004 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D03chromosomeGbar_D03:1929216..1929316 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D03chromosomeD03:1965672..1965772 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017625.1chromosomeCM017625.1:1971840..1971940 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017651.1chromosomeCM017651.1:2043315..2043415 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017703.1chromosomeCM017703.1:1937325..1937425 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D03chromosomeD03:2104037..2104137 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr_03chromosomeChr_03:1524957..1525059 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr03chromosomeChr03:1933317..1933417 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch17_Dt.03N/A27.54i25863GhView
Sequence
>TAMU_GH_TBb029A18f211 ID=TAMU_GH_TBb029A18f211; Name=TAMU_GH_TBb029A18f211; organism=Gossypium sp.; type=genetic_marker; length=105bp
ACTCCTCTTTTTCACAATAAAAATCCGACGAATGAGCATCCAAGTCATCT
[C/T]ATCCTAGAGCCCCAAAGAGCTCTTCAAGCTCATCTTCCCCTAGCC
CTAGT