TAMU_GH_TBb007H06f487, TAMU_GH_TBb007H06f487 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb007H06f487
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i23685Gh
TypeSNP
SNP AllelesT/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A02chromosomeA02:89527142..89527242 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018203.1chromosomeCM018203.1:99002223..99002323 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
scaffold1588.1supercontigscaffold1588.1:360290..360390 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A02chromosomeA02:82536307..82536407 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A02chromosomeGhir_A02:107182043..107182143 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A02chromosomeA02:107386187..107386287 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A02chromosomeA02:104842510..104842610 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A02chromosomeA02:103419996..103420096 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A02chromosomeGbar_A02:99317080..99317180 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A02chromosomeA02:101250223..101250323 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017611.1chromosomeCM017611.1:104227463..104227563 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017637.1chromosomeCM017637.1:108981146..108981246 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017689.1chromosomeCM017689.1:101400385..101400485 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A02chromosomeA02:107302468..107302568 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:92027926..92028026 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
13-79 x TM-1, F2 (2015 SNP)AD_ch02_At.02N/A12.41i23685GhView
Sequence
>TAMU_GH_TBb007H06f487 ID=TAMU_GH_TBb007H06f487; Name=TAMU_GH_TBb007H06f487; organism=Gossypium sp.; type=genetic_marker; length=105bp
TTCGAGCGACGCTTAAACAAATCTTTCAAATACGTGAAGAGATAGTTTTT
[G/T]ATTCGAAAAAGCATAATAGAAGTAGCCATGGGAGCGTAGGCCGAG
AACAA