NAU_TM82259, NAU_TM82259 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM82259
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM82259
TypeSNP
SNP AllelesA/C
5' Flanking SequenceTAACTGAAATGTTCACTTCGGGATCTCTCAGAGCGTACTGCTCTTTCTTACTCTTCTTCT
3' Flanking SequenceCTCCTACCTCTTCAACACAAGTATATAAACCACTAATTGATGATGAGATTGCTGTCAACC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018227.1chromosomeCM018227.1:60377179..60377299 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
tig00007416_CRI-A2_v1.0.a1chromosometig00007416_CRI-A2_v1.0.a1:8840..8960 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold1451.1supercontigscaffold1451.1:411501..411621 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold1451.1supercontigscaffold1451.1:410448..410568 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D13chromosomeD13:60495265..60495385 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D13chromosomeGhir_D13:63272350..63272470 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D13chromosomeD13:64394275..64394395 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D13chromosomeD13:63868145..63868265 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D13chromosomeD13:60126088..60126208 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D13chromosomeGbar_D13:60281938..60282058 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D13chromosomeD13:61234176..61234296 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017635.1chromosomeCM017635.1:60940207..60940327 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017635.1chromosomeCM017635.1:60930202..60930322 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017661.1chromosomeCM017661.1:64452586..64452706 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017713.1chromosomeCM017713.1:60764723..60764843 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D13chromosomeD13:65047451..65047571 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:122599379..122599499 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM82259 ID=NAU_TM82259; Name=NAU_TM82259; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TAACTGAAATGTTCACTTCGGGATCTCTCAGAGCGTACTGCTCTTTCTTA
CTCTTCTTCT[A/C]CTCCTACCTCTTCAACACAAGTATATAAACCACTA
ATTGATGATGAGATTGCTGTCAACC