NAU_TM82238, NAU_TM82238 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM82238
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM82238
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGTTTTTTCTTTTTTAAAAACTCCACATTGTTACTTTAACAACAACAACTAGCTTGTTATC
3' Flanking SequenceATTTAGACATACTAATTAACATAAAAAAAAGCATAAAGATCAAATTATGTTAAATTAAAA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018227.1chromosomeCM018227.1:59894053..59894174 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D10_13chromosomeD10_13:60270318..60270438 +Gossypium turneri (D10) genome NSF_v1_a2n/a
At_chr4chromosomeAt_chr4:36734453..36734573 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D13chromosomeD13:60011688..60011808 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D13chromosomeGhir_D13:62792235..62792355 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D13chromosomeD13:63921762..63921882 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D13chromosomeD13:63387617..63387737 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D13chromosomeD13:59635525..59635645 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D13chromosomeGbar_D13:59774299..59774420 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D13chromosomeD13:60729090..60729210 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017635.1chromosomeCM017635.1:60452993..60453114 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017661.1chromosomeCM017661.1:63921447..63921567 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017713.1chromosomeCM017713.1:60256714..60256835 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D13chromosomeD13:64553272..64553392 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:59696183..59696301 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr13chromosomechr13:44793604..44793723 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_13chromosomeChr_13:43598059..43598179 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Sequence
>NAU_TM82238 ID=NAU_TM82238; Name=NAU_TM82238; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GTTTTTTCTTTTTTAAAAACTCCACATTGTTACTTTAACAACAACAACTA
GCTTGTTATC[A/G]ATTTAGACATACTAATTAACATAAAAAAAAGCATA
AAGATCAAATTATGTTAAATTAAAA