NAU_TM76050, NAU_TM76050 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM76050
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM76050
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAACACCTCTCGACGCTAAAAGATTTTGAATATACCTTCGAGCAATTGCTTCCATTTCCCC
3' Flanking SequenceGCTTCAGAAATCTCCCTGCTAGACACATATTCTAAGCATATAATAAAATTTCTCCGATGT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018225.1chromosomeCM018225.1:18343435..18343554 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_11chromosomeD5_11:47821596..47821713 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr7chromosomeDt_chr7:19240532..19240652 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D11chromosomeD11:18574278..18574398 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D11chromosomeGhir_D11:18941573..18941693 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D11chromosomeD11:18438590..18438710 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D11chromosomeD11:18951614..18951734 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D11chromosomeD11:18737492..18737612 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D11chromosomeGbar_D11:18640802..18640921 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D11chromosomeD11:18515927..18516046 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017633.1chromosomeCM017633.1:18384943..18385063 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:18922402..18922522 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017711.1chromosomeCM017711.1:18522916..18523035 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D11chromosomeD11:19311120..19311240 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr11chromosomeChr11:45742814..45742931 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch21_Dt.11N/A103.86TM76050View
Sequence
>NAU_TM76050 ID=NAU_TM76050; Name=NAU_TM76050; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AACACCTCTCGACGCTAAAAGATTTTGAATATACCTTCGAGCAATTGCTT
CCATTTCCCC[C/T]GCTTCAGAAATCTCCCTGCTAGACACATATTCTAA
GCATATAATAAAATTTCTCCGATGT