NAU_TM70199, NAU_TM70199 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM70199
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM70199
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTGTTTGTCAAATTAAACTATGATGCTTCCTTCAACCCCGCTTCTGAGTTTTATGGCATT
3' Flanking SequenceGTGTTATTTGCAGAGACCACTTCAGTTCCTTGGTTGATGAGATGTCTGATCTTGTCCCCA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018223.1chromosomeCM018223.1:3970748..3970868 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_09chromosomeD5_09:4153955..4154075 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr6chromosomeDt_chr6:44602826..44602946 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D09chromosomeD09:4241034..4241154 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D09chromosomeGhir_D09:4185824..4185944 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D09chromosomeD09:4057682..4057802 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D09chromosomeD09:4079771..4079891 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D09chromosomeD09:3868997..3869117 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D09chromosomeGbar_D09:4036396..4036516 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017631.1chromosomeCM017631.1:4151600..4151720 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017709.1chromosomeCM017709.1:4125715..4125835 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D09chromosomeD09:4274815..4274935 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:4254595..4254715 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr06chromosomeChr06:4103311..4103431 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr06chromosomechr06:3761060..3761180 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr06chromosomeChr06:4283079..4283199 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr06chromosomeChr06:2973438..2973558 +Gossypium lobatum (D7) genome ISU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch23_Dt.09N/A6.9TM70199View
2LMY28 x XLZ24, RIL (2018)AD_ch23_Dt.09N/A50.73TM70199View
Sequence
>NAU_TM70199 ID=NAU_TM70199; Name=NAU_TM70199; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTGTTTGTCAAATTAAACTATGATGCTTCCTTCAACCCCGCTTCTGAGTT
TTATGGCATT[A/G]GTGTTATTTGCAGAGACCACTTCAGTTCCTTGGTT
GATGAGATGTCTGATCTTGTCCCCA