NAU_TM66757, NAU_TM66757 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM66757
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM66757
TypeSNP
SNP AllelesA/C
5' Flanking SequenceAGCATTATATCTGCCCTATTAGAGGCTTCACAATAGAGCATTTTTCATTTCTCACTTACC
3' Flanking SequenceAGATGATCGTATTTCTGTCTGACATTTCTTTTTGCACCATAACTATACCTGTACTTTTAC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018221.1chromosomeCM018221.1:54724818..54724938 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_07chromosomeD5_07:50142576..50142696 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold104.1supercontigscaffold104.1:1242513..1242633 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D07chromosomeD07:53863583..53863703 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D07chromosomeGhir_D07:57825374..57825494 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D07chromosomeD07:57067456..57067576 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D07chromosomeD07:57448577..57448697 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D07chromosomeD07:53780430..53780550 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D07chromosomeGbar_D07:55114816..55114936 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D07chromosomeD07:55697038..55697158 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017629.1chromosomeCM017629.1:55656865..55656985 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017655.1chromosomeCM017655.1:56672147..56672267 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017707.1chromosomeCM017707.1:55731151..55731271 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D07chromosomeD07:58045246..58045366 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:1329553..1329673 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch16_Dt.07N/A136.5TM66757View
2LMY28 x XLZ24, RIL (2018)AD_ch16_Dt.07N/A12.56TM66757View
Sequence
>NAU_TM66757 ID=NAU_TM66757; Name=NAU_TM66757; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGCATTATATCTGCCCTATTAGAGGCTTCACAATAGAGCATTTTTCATTT
CTCACTTACC[A/C]AGATGATCGTATTTCTGTCTGACATTTCTTTTTGC
ACCATAACTATACCTGTACTTTTAC