NAU_TM29546, NAU_TM29546 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM29546
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM29546
TypeSNP
SNP AllelesG/A
5' Flanking SequenceGACCCTTTTTAGCGACTGCCAGGACTGTTATTAATGTTGGTACAGATAAACTTACACTTC
3' Flanking SequenceTGCAGGTGATGAAACGGTTACTCTTCAAGCTCGTGATTCGATTGAGATATCAAGTAATGA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018209.1chromosomeCM018209.1:109122246..109122366 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:118671340..118671460 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold149.1supercontigscaffold149.1:615392..615512 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:94481750..94481870 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:112348122..112348242 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:115265517..115265637 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:115163769..115163889 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:111076118..111076238 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:109800053..109800173 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:110895912..110896032 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:109329313..109329434 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:118771534..118771654 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017695.1chromosomeCM017695.1:109932320..109932440 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A08chromosomeA08:117058441..117058561 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:122320110..122320230 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch08_At.08N/A99TM29546View
2LMY28 x XLZ24, RIL (2018)AD_ch08_At.08N/A81.94TM29546View
Sequence
>NAU_TM29546 ID=NAU_TM29546; Name=NAU_TM29546; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
GACCCTTTTTAGCGACTGCCAGGACTGTTATTAATGTTGGTACAGATAAA
CTTACACTTC[A/G]TGCAGGTGATGAAACGGTTACTCTTCAAGCTCGTG
ATTCGATTGAGATATCAAGTAATGA