NAU_TM21903, NAU_TM21903 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM21903
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM21903
TypeSNP
SNP AllelesT/A
5' Flanking SequenceACAATATTAATTATCAACAATTGAAGGGCAATTTTATATTCAATTGTAAAAATAAAACAT
3' Flanking SequenceGATTACATTACAGAACCATGAAAAATACTTTCAAGTTATCAAGTAGGTTGTTTTCCATAC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018209.1chromosomeCM018209.1:3882539..3882659 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:4123275..4123395 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold417.1supercontigscaffold417.1:774485..774605 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:3394547..3394667 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:3841303..3841423 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:3940000..3940120 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:4235108..4235228 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:3819507..3819627 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:4188751..4188871 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:4058258..4058378 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:4116132..4116252 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:4257110..4257230 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017695.1chromosomeCM017695.1:3982145..3982265 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A08chromosomeA08:4283974..4284094 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:4190658..4190778 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr08chromosomeChr08:4467252..4467372 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
F08chromosomeF08:3459905..3460024 +Gossypium longicalyx (F1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch08_At.08N/A122.25TM21903View
Sequence
>NAU_TM21903 ID=NAU_TM21903; Name=NAU_TM21903; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACAATATTAATTATCAACAATTGAAGGGCAATTTTATATTCAATTGTAAA
AATAAAACAT[A/T]GATTACATTACAGAACCATGAAAAATACTTTCAAG
TTATCAAGTAGGTTGTTTTCCATAC