TAMU_GH_TBb005H08r732, TAMU_GH_TBb005H08r732 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb005H08r732
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i23482Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr12chromosomeChr12:22550093..22550093 .Gossypium raimondii (D5) genome JGI_v2_a2.1n/a
D04chromosomeD04:42519049..42519115 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018218.1chromosomeCM018218.1:40891933..40891999 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_04chromosomeD5_04:12953663..12953729 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr12chromosomeDt_chr12:15678163..15678229 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D04chromosomeD04:37817405..37817471 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D04chromosomeGhir_D04:42612800..42612866 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D04chromosomeD04:43683530..43683596 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D04chromosomeD04:42800060..42800126 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D04chromosomeD04:40436126..40436192 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D04chromosomeGbar_D04:38994032..38994098 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D04chromosomeD04:44138523..44138589 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017626.1chromosomeCM017626.1:41232150..41232216 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017652.1chromosomeCM017652.1:43957350..43957416 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017704.1chromosomeCM017704.1:41205603..41205669 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D04chromosomeD04:44275311..44275377 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:12912257..12912323 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
chr12chromosomechr12:19107127..19107193 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr12chromosomeChr12:40473953..40474019 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr12chromosomeChr12:17816009..17816075 +Gossypium aridum (D4) genome ISU_v1n/a
Chr12chromosomeChr12:16995748..16995814 +Gossypium lobatum (D7) genome ISU_v1n/a
F04chromosomeF04:75013771..75013835 +Gossypium longicalyx (F1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch22_Dt.04N/A53.76i23482GhView
Sequence
>TAMU_GH_TBb005H08r732 ID=TAMU_GH_TBb005H08r732; Name=TAMU_GH_TBb005H08r732; organism=Gossypium sp.; type=genetic_marker; length=71bp
CAACCGAAATGTTTGTTATTATTGGGAAATAGTGATTAGAGTGGTTTACA
[C/T]TGATATGCTGAAAGTC