NAU_TM01432, NAU_TM01432 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM01432
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM01432
TypeSNP
SNP AllelesG/A
5' Flanking SequenceTTGTAGCTATTTTGACAACGAATGTGGCACACTGTAACTCGGACTTGGTGATTTGGTCGG
3' Flanking SequenceTATGGGGTGTTACAAATTGTTCTTTTTCAATGTTACTCGCGGAAACCTCGATAGTTTTGA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:45514963..45515083 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:48474283..48474403 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold1126.1supercontigscaffold1126.1:538528..538648 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:45763947..45764067 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:48867082..48867202 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:47945924..47946044 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:47723754..47723874 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:46961957..46962077 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:45797412..45797532 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:46226638..46226758 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:44177391..44177511 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:49964341..49964461 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:46015533..46015653 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:49244827..49244947 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:51334176..51334293 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:48918646..48918766 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch01_At.01N/A93.1TM1432View
Sequence
>NAU_TM01432 ID=NAU_TM01432; Name=NAU_TM01432; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTGTAGCTATTTTGACAACGAATGTGGCACACTGTAACTCGGACTTGGTG
ATTTGGTCGG[A/G]TATGGGGTGTTACAAATTGTTCTTTTTCAATGTTA
CTCGCGGAAACCTCGATAGTTTTGA