NAU_TM00662, NAU_TM00662 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00662
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00662
TypeSNP
SNP AllelesC/G
5' Flanking SequenceATTGTATGAGCTTAGCCAACCATGCAGACATTCGGTCCTTTCTAGACCTGTATTTTATTA
3' Flanking SequenceCTATTAGATGGAGCTAAAAAGTTAAAATTAGGGAATTTTTCACCTTTATAGATAACTTCA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:11780904..11781024 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:13234738..13234857 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:12195350..12195470 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:11557070..11557190 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:12299342..12299462 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:11896140..11896260 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:12196076..12196196 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:12038557..12038677 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:11926555..11926675 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:11946489..11946609 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:12908167..12908287 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:12231392..12231512 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:12043302..12043422 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:12198663..12198783 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:11837240..11837360 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:13124703..13124822 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>NAU_TM00662 ID=NAU_TM00662; Name=NAU_TM00662; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ATTGTATGAGCTTAGCCAACCATGCAGACATTCGGTCCTTTCTAGACCTG
TATTTTATTA[C/G]CTATTAGATGGAGCTAAAAAGTTAAAATTAGGGAA
TTTTTCACCTTTATAGATAACTTCA