NAU_TM00603, NAU_TM00603 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00603
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00603
TypeSNP
SNP AllelesG/A
5' Flanking SequenceATGGTACTTGAATTATGCTCCATAACTAGAACAGAAGATTTCTTTATGCACATAAAAGCT
3' Flanking SequenceCATTCTTTTAGCTCAATGTGCTTATTTAAAAGATGTGACTTCTCTAGCTGCTAAGTGCTA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:10307827..10307947 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:11809096..11809216 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:10705100..10705220 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:10046592..10046712 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:10499461..10499581 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:9990172..9990292 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:10621997..10622117 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:10441193..10441313 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:10392689..10392809 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:10001029..10001149 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:11435472..11435592 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:10700517..10700637 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:10585549..10585669 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:10633877..10633997 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:10702704..10702824 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:11650144..11650264 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch01_At.01N/A39TM603View
Sequence
>NAU_TM00603 ID=NAU_TM00603; Name=NAU_TM00603; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ATGGTACTTGAATTATGCTCCATAACTAGAACAGAAGATTTCTTTATGCA
CATAAAAGCT[A/G]CATTCTTTTAGCTCAATGTGCTTATTTAAAAGATG
TGACTTCTCTAGCTGCTAAGTGCTA