NAU_TM00589, NAU_TM00589 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM00589
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM00589
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTTCCATGCACTGGAAAGCCATCTCTTATATGACATATTTTTATTGTGTCTAGTAATCTG
3' Flanking SequenceCCTTTCTATTGCACGTTAAGCACGTAGTTAGGCCTTCACTAGTGAATTTTCTAGCCATAA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:10193601..10193721 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:11694906..11695026 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:10590487..10590607 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:9932649..9932769 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:10385376..10385496 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:9881078..9881198 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:10507808..10507928 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:10328692..10328812 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:10278448..10278568 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:9888268..9888388 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:11321327..11321447 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:10586252..10586372 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:10471367..10471487 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:10519672..10519792 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:10588444..10588564 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:11535957..11536077 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch01_At.01N/A43.09TM589View
Sequence
>NAU_TM00589 ID=NAU_TM00589; Name=NAU_TM00589; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTTCCATGCACTGGAAAGCCATCTCTTATATGACATATTTTTATTGTGTC
TAGTAATCTG[A/G]CCTTTCTATTGCACGTTAAGCACGTAGTTAGGCCT
TCACTAGTGAATTTTCTAGCCATAA